Phocoena sinus (vaquita): 116749969
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Entry
116749969 CDS
T07759
Symbol
NOVA1
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116749969 (NOVA1)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116749969 (NOVA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
116749969
NCBI-ProteinID:
XP_032480736
Ensembl:
ENSPSNG00000015532
UniProt:
A0A8C9CE14
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All DBs
Position
2:complement(105861110..106003444)
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AA seq
507 aa
AA seq
DB search
MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA
AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI
REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPN
STAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQK
IQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGLLGHANLAGVAAF
PAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAAN
LLATYASEASASGSTAGGTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEKSTDGS
KDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAA
TQAAQYLITQRITYEQGVRAANPQKVG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcagctcccatccagcagaacgggacccacactggggttcccatagacctg
gacccgccggactcgcggaaaaggccgctggaagccccccctgaagccggcagcaccaag
aggaccaatacgggcgaagacggccagtattttctaaaggttctcatacctagttatgct
gctggatctataattgggaagggaggacagacaattgttcagttgcaaaaagaaactgga
gccaccatcaagctgtctaagtccaaagatttttacccaggtactactgaacgagtgtgc
ttgatccagggaacagttgaagcactgaatgcagttcatggattcattgcagaaaaaatt
cgagaaatgccccaaaatgtggccaagacagaaccagtcagcattctacaaccccagacc
accgttaacccagatcgcatcaaacaaacattgccatcttccccaactaccaccaagtcc
tctccatctgatcccatgaccacctccagagctaatcaggtaaagattatagttcccaac
agcacagcaggtctgataatagggaagggaggtgctactgtgaaggctataatggagcag
tcaggggcttgggtgcagctttcccagaaacctgatgggatcaacctgcaagagagggtt
gtcactgtgagtggagaacctgaacaaaaccgaaaagctgttgaacttatcatccagaag
atacaagaggatccacagagtggcagctgtctcaatatcagttatgccaatgttacaggt
ccggtggcaaattccaatccaacgggatctccttatgcaaacactgctgaagttctacca
accgctgcagcagccgcagggctattaggacatgctaaccttgctggtgttgcagccttt
ccagcagttttatctggcttcacaggcaacgacctggtggccatcacctctgcacttaat
acattagccagctatggatacaatctcaacacattaggtttaggtctcagtcaagcagca
gcaacaggggctttggctgcagcagctgccagtgccaatccagcggcagcagcagccaat
ttgttggccacctatgccagtgaagcctcagccagtggcagcacagctggtggtacggcg
gggacattcgcattaggtagcctggctgctgctactgctgcaaccaatggatactttgga
gctgcttctcccctagctgccagtgccattctaggaacagaaaaatccacagatggatca
aaggatgtagttgaaatagcagtgccagaaaacttagttggtgcaatacttggcaaagga
gggaaaacattagtggaataccaggagttgactggtgcaaggatacagatctccaaaaaa
ggagaattcgtacctggcacaaggaatcggaaggtgaccattactggaacaccagctgca
acacaggctgctcaatatttaattacacaaaggatcacatatgagcaaggagttcgggcc
gccaatcctcagaaagtgggttga
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