Phocoena sinus (vaquita): 116750021
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Entry
116750021 CDS
T07759
Symbol
LRR1
Name
(RefSeq) leucine-rich repeat protein 1 isoform X1
KO
K10348
LRR-repeat protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116750021 (LRR1)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
116750021 (LRR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_6
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
116750021
NCBI-ProteinID:
XP_032480834
Ensembl:
ENSPSNG00000013807
LinkDB
All DBs
Position
2:127322088..127335171
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AA seq
425 aa
AA seq
DB search
MKLYCEVEVVSRHLPALGLRNRGKGVRAVLSLCQQAPRTQPRPRAGGERGGRHHACLFIS
TLKDKLGTRYEQLKENIEQFFTKFVDEGKATVRLKEPPVDICLSKANSSSLKGFLSAVRL
AHRGCDVEAPLLTFTPVKTSEFEKFKTKMVITSKKDYPLSKNFPYSLEHLQTSYCGLARV
DIRMLSLKNLRKLDLSHNHIKKLPATIGDLIHLQELNLNDNHLESFSVALCQSTLQNSLR
SLDLSKNKIKALPVQFCQLQELTDLKLDDNELIRLPFKMGQLTNLRFLSAARNKLPFLPS
EFKNLSLEYLDLFGNIFEQPEVLPVIKLQMPLTLLESSARTVLYNRIPYGSHIIPFHLCQ
DLDTAKTCVCGRFCLSCFIQGTTTMNLHSVAHTVVLVDNMGGTEAPVVSYFCSLTCYVNS
CDMLM
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtactgcgaggtggaggtggtcagtcggcacttgccggccttggggctgagg
aacaggggcaagggcgtccgggcggtgttgagcctctgtcagcaggcgcccaggactcag
ccgcggccccgagcggggggcgagcggggcggccggcaccacgcctgcctgttcatttcc
actctgaaggataagctcgggacccgctatgagcagctaaaggagaacattgagcagttc
ttcaccaaatttgtggatgaggggaaagccactgttcggttaaaggagcctcccgtggat
atctgtctaagtaaggccaattccagcagtctaaagggtttcctttcagctgtgagactg
gctcacagaggctgtgatgttgaggcaccacttttaaccttcacaccagtgaagacttca
gaatttgaaaaatttaaaactaaaatggttatcacatccaaaaaggactatcctctaagc
aagaacttcccctattctctggaacatcttcagacttcttattgtgggcttgcccgggtt
gatatacgtatgctttccttaaaaaaccttagaaaattagacttgagtcacaaccatata
aaaaagcttccagctacaattggagacctcatccaccttcaagaacttaacctgaatgat
aatcacttggagtcatttagtgtagccttgtgtcagtctacactccagaattcacttcgg
agtttggatctcagcaagaacaaaattaaggcactccctgtgcagttttgccagctccaa
gaacttacagatttaaaacttgatgataatgaattgattcgacttcctttcaagatggga
caactgacaaacctgcgttttttgtcagcggctcgaaataagcttccgtttttgcctagt
gaatttaaaaatttatctcttgagtacttggatctttttggaaatatttttgaacaacca
gaagtccttccagttataaagctgcaaatgccattaactttattggaatcttctgcgcga
accgtactatataataggattccatatggctctcatatcattcctttccatctttgccaa
gatttggatactgcaaaaacgtgtgtttgtggaagattctgtctaagttgttttattcaa
ggaactactaccatgaacctacactctgtagctcacactgtggtcttagtagataatatg
ggtggtactgaagcacctgttgtctcttacttctgttctctaacctgttatgtaaattcc
tgtgatatgttaatgtaa
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