Phocoena sinus (vaquita): 116750038
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Entry
116750038 CDS
T07759
Symbol
TRIM33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psiu01001
]
116750038 (TRIM33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116750038 (TRIM33)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116750038 (TRIM33)
Protein kinases [BR:
psiu01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
116750038 (TRIM33)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116750038 (TRIM33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
zf-C3HC4_2
UvrA_inter
Motif
Other DBs
NCBI-GeneID:
116750038
NCBI-ProteinID:
XP_032480862
Ensembl:
ENSPSNG00000002067
UniProt:
A0A8C9B078
LinkDB
All DBs
Position
1:complement(102107407..102258197)
Genome browser
AA seq
1123 aa
AA seq
DB search
MAENKGGGEAESGGGGSSSAPVTAGAAGPAAQEAEPPLAAVLVEEEEEEGGRAGAESGAA
GPDDGGVAAASSGSAPAASAPAASVGPGIPGGAVSTPAPAPASAPAPGPSAGPPASLLDT
CAVCQQSLQSRREAEPKLLPCLHSFCLRCLPEPERQLNVPIPGGSNGDIQQVGVIRCPVC
RQECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEA
HQRVKFTKDHLIRKKEDVSESVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEH
KEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVHFAATQVQNRIKEVNETNKRVEQEIKV
AIFTLINEINKKGKSLLQQLENVTKERQMKLLQQQNDITGLSRQVKHVMNFTNWAIASGS
STALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAP
GYTPNVVVGQVPPGTNHISKTPGQINLAQLRLQHMQQQVYAQKHQQLQQMRMQQPPAPVP
TTTATTQQHPRQAAPQMLQQQPPRLISVQAMQRGNMNCGAFQAHQMRLAQNAARIPGIPR
HSGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNNPVNPTSPTTATMANANRGPTSPSVTA
IELIPSVTNPENLPSLPDIPPIQLEDAGSSSLDNLLSRYISGSHLPPQPTSTMNPSPGPS
ALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQVKVKQEPGTEDE
VCSFSGAVKQEKIEDGRRSACMLSSPESSLTPPLSTSLHLESELDALAGLENHVKTEPTD
VNESCKQSGLNSLVNGKSPVRSLMHRSARIGGDGSSKDDDPNEDWCAVCQNGGDLLCCEK
CPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDNLQHSKKGKTAQGLSPVDQR
KCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQIPDDF
VADVRLIFKNCERFNEMMKVVQVYAETQEINLKADSEVAQAGKAVALYFEDKLTEIYSDR
TFAPLPEFEQEEDDGEVTEDSDEDFIQPRRKRLKSDERPVHIK
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacaaaggcggtggcgaggctgagagcggcggcgggggcagcagcagcgcg
ccggtaactgccggggccgccgggcccgcggcgcaggaggcggagccgcctctcgccgcg
gtgttggtggaggaggaggaggaggaaggcggcagggccggcgcggagagcggcgcggcc
gggcccgacgacgggggggtggccgcggcctcctcgggctcggccccggctgcctcagcc
cctgcagcctcagtgggccctggaattcccgggggggcggtatcgacgccggccccagct
ccggcttcggctcctgctccgggtccctcggcggggccgccagcctcgctcctggacacc
tgcgccgtgtgtcagcagagcctgcagagccggcgtgaggcggagcccaagctgctgccc
tgtcttcactctttctgcctgcgctgtctgccggagcccgagcgccaactcaacgtgccc
atcccggggggcagcaacggcgacatccagcaagttggtgtaatacggtgcccagtatgc
cgccaagaatgcagacagatagaccttgtggataattattttgtgaaagatacatctgaa
gctcctagcagttctgatgagaaatcagaacaggtatgtactagttgtgaagacaatgca
agtgcagttggcttttgtgtagaatgtggagagtggctatgtaagacatgtattgaagca
catcaaagagtaaaattcactaaagatcacttgatcaggaagaaagaagatgtctcagag
tctgttggagcatctggtcagcgccctgttttctgccctgtacacaaacaagaacagttg
aaacttttctgtgaaacatgtgataggctgacatgtagagactgtcagctattggaacac
aaagaacataggtatcaatttttagaagaagcttttcaaaaccagaaaggtgcaattgag
aatctgctggctaagcttcttgagaagaagaattatgttcattttgcagctactcaggtg
cagaataggataaaagaagtaaatgagactaacaaacgagtagaacaggaaattaaagtg
gccattttcacccttatcaatgaaattaataagaaaggaaaatctctgttacagcagcta
gagaatgttacaaaagaaagacagatgaagttactacagcaacagaatgacatcacaggc
ctttcccggcaggtgaagcatgttatgaactttacaaactgggcaattgctagtggtagc
agcacggcactactgtacagcaagcgactgattacttttcagttgcgccatattttgaaa
gcacggtgtgatcctgtccctgctgctaatggagcaatacgtttccattgtgatcccacc
ttctgggcaaagaacgtagtcaatttaggtaatctagtaatagagagtaaaccagctcct
ggttatactcctaatgttgtagttgggcaagttccgccagggacaaaccacattagtaaa
acccctggacagattaacttagcacagcttcgactccagcacatgcaacaacaagtgtat
gcacagaaacatcagcagttgcaacagatgaggatgcagcagccacctgcacctgtacca
acaacaacagcaacaacacagcagcaccctagacaagcagcccctcagatgttacaacaa
cagcctccaagattgatcagtgtgcaagcaatgcaaagaggcaacatgaactgtggagct
ttccaagcccatcagatgagattggctcagaatgctgcccgaataccagggatacccagg
cacagtggccctcagtattccatgatgcagccacacctccaaagacaacactcaaaccca
gggcatgctggaccctttcctgttgtgtcggtgcacaacaacccagtcaatccaaccagc
cctactacagctactatggcaaatgcaaatcgaggtcccactagcccatctgttacagca
atagaactaattccttcagttaccaatccagaaaaccttccgtcgctgccagatattcca
cccatacagttggaagatgctggttcaagtagtttagataatctactaagtagatacatc
tcaggcagtcacctacccccacagcccacaagcaccatgaatccctccccaggaccctct
gccctatctccaggatcatcaggtttatccaattctcacacacctgtgagaccccctagt
acttctagtactggtagtcgaggcagctgtgggtcgtcaggaagaactgctgagaagaca
agtcttagtttcaagtctgatcaagtgaaggtcaagcaagaacctggcactgaagatgaa
gtatgtagcttttcaggagctgtgaaacaggaaaagatagaggatggcaggaggagtgcc
tgcatgttgagcagtcctgagagtagcttgacaccacctctttcaactagcctgcatcta
gagagtgagttggatgcattagcaggcctggaaaaccacgtgaaaactgaacctacagat
gtgaatgaaagctgcaaacagtcagggctcaacagccttgttaatggaaagtccccagtt
cgaagtctcatgcacaggtcggcaaggattggaggagatggcagcagcaaagatgatgac
ccaaatgaagattggtgtgctgtctgccaaaatggaggggatctcttgtgctgtgaaaaa
tgtccaaaggtctttcatctaacttgtcatgttccaacacttcttagctttccaagtggg
gactggatatgcacattttgcagagatattgggaaaccagaagttgaatatgattgtgat
aatttgcaacatagtaagaaggggaaaactgcacaggggttaagccccgtggaccaaagg
aagtgtgaacgtcttctgctttacctctattgccatgaattaagtattgaattccaggag
ccagttcctgcttcgataccaaactactataaaattataaagaaacctatggatttatca
accgtgaaaaagaagcttcagaaaaaacattcccaacactaccaaatcccagatgacttt
gtggctgatgttcgtttgatcttcaagaactgtgaaaggtttaatgaaatgatgaaagtt
gttcaagtttatgcagaaacacaagagattaatttgaaggctgattcagaagtagctcag
gcagggaaagcagttgcattgtactttgaagataaactcacagagatctactcagacagg
accttcgcacctttgccagagtttgagcaggaagaggatgatggtgaggtaactgaggac
tctgatgaagactttatacagccccgcagaaaacgcctaaagtcagatgagagaccagta
catataaagtaa
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