Phocoena sinus (vaquita): 116750338
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Entry
116750338 CDS
T07759
Symbol
ARNT
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04066
HIF-1 signaling pathway
psiu04148
Efferocytosis
psiu04934
Cushing syndrome
psiu05200
Pathways in cancer
psiu05207
Chemical carcinogenesis - receptor activation
psiu05208
Chemical carcinogenesis - reactive oxygen species
psiu05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
116750338 (ARNT)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116750338 (ARNT)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116750338 (ARNT)
05207 Chemical carcinogenesis - receptor activation
116750338 (ARNT)
05208 Chemical carcinogenesis - reactive oxygen species
116750338 (ARNT)
09162 Cancer: specific types
05211 Renal cell carcinoma
116750338 (ARNT)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
116750338 (ARNT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116750338 (ARNT)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116750338 (ARNT)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
Per3-like_PAS-A
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
116750338
NCBI-ProteinID:
XP_032480883
Ensembl:
ENSPSNG00000002599
UniProt:
A0A8C9DXA3
LinkDB
All DBs
Position
1:complement(110213826..110278134)
Genome browser
AA seq
790 aa
AA seq
DB search
MAATTANPEMTSDVPSLGPAIASGNPGPGIQGGGAIVQRAIKRRPGLDFDDDGEGNSKFL
RCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCS
ALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVS
CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLK
TGTVKKEGQQSSMRMCMGSRRSFICRMRCGSSSVDPVSMNRLSFVRNRCRNGLGSVKDGE
PHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFCLVAIGRLQVTSSPNCTDMSNVCQP
TEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKG
QVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQEPRPTLPNTIQ
RPQLGPTANLSLEMGSGQLAPRQQQQQTELDVVPGRDGLASYNHSQVSVQPVTTTGPEHS
KPLEKSEGLFAQDRDPRFSEIYSNINTDQSKGISSSTVPATQQLFSQGNTFPPTSRPAEN
FRNSGLAPPVTIVQPSASAGQMLAQISRHSNPTQGAAPAWTPSTRPGFSAQQVATQATAK
TRSSQFGVGNFQTPSSFSPMSLPGASTASPGAAAYPSLTNRGSNFAPETGQTAGQFQTRT
AEGVGVWAHWQGQQPHHRSSSNEQHVQQPSAQQPGQPEVFQEMLSMLGDQSNSYNNEEFP
DLTMFPSFSE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactactgctaaccccgaaatgacgtcagatgtaccatcactgggtccagcc
attgcctctggaaaccctgggcctgggattcaaggtggaggagccattgtccagagggct
attaagcggcgaccaggattggattttgatgatgatggagaagggaacagtaaatttttg
aggtgtgatgacgatcagatgtctaatgataaggagcggtttgccaggtcggatgatgag
cagagctctgcggataaggagagactcgccagggaaaaccatagtgaaattgaacggcgc
cgacggaacaagatgacagcctacataacagaactgtcagacatggtacccacctgtagt
gccctggctcgaaaaccagacaagctaaccatcttacgcatggcggtttctcacatgaag
tccttgcgaggaactggcaacacatccactgatggcacctacaagccgtctttcctcact
gatcaggaactgaaacatttgatcttggaggcagcagatggctttctgtttattgtctca
tgtgagacaggccgggtggtatatgtctctgactcagtgacccctgttttgaaccagcca
cagtctgaatggtttggtagcacactctatgatcaggtgcacccagatgatgtggacaaa
cttcgtgagcagctttccacttcggaaaatgccctgacagggcgtatccttgatctgaag
actggaacagtgaaaaaggaaggtcaacagtcttccatgaggatgtgtatgggctcaagg
agatcttttatttgccgtatgaggtgtggcagtagctctgtggacccagtctccatgaat
agactgagctttgtaagaaacagatgcaggaatggacttggctccgtgaaggatggggaa
cctcatttcgtggtggtccactgcacaggctatatcaaggcctggcccccagcaggtgtc
tccctcccagatgatgacccagaggctggccaggggagcaagttttgcctagtggctatt
ggcagactacaggtaactagttctcccaactgtacagacatgagtaatgtttgtcagcca
acggagttcatctctcgacacaatattgagggaatcttcacttttgtggatcatcgctgt
gtggctaccgttggctaccaaccacaggaactcttaggaaagaatattgtagaattctgt
catcctgaagaccagcagcttctaagagacagcttccaacaggtggtgaagttaaaaggc
caggtgctatctgtcatgttccggtttcggtctaagaaccgagaatggctctggatgaga
accagctcttttactttccagaacccttactcagatgaaattgagtacatcatctgtacc
aacaccaatgtgaagaactctagccaggaaccacggcctacactgcccaacacaatccag
aggccacagctaggtcccacagctaatttatccctggagatgggctcagggcagctggca
cccaggcagcagcaacagcaaacagaattggatgtggtaccaggaagagatggactagcc
agctacaatcattcccaggtttctgttcagcctgtgacaaccacagggccagaacacagc
aagcctctcgagaagtcagagggtctatttgcccaagatagagatccaagattttcagaa
atctactccaacatcaatacagatcagagtaaaggcatctcctccagcactgtccctgcc
acccaacagttattctcccagggcaacacattccctcctacctcccggccggcagagaat
ttcagaaatagtggtctggcccctcctgtaaccattgtccagccatcagcttctgcaggg
cagatgttggcccagatttctcgccactccaatcctacccagggagcagccccagcttgg
acccctagcacccgcccaggcttctctgcccagcaggtggctacccaggctacagccaag
actcgttcttcccaatttggtgtaggcaactttcagactccatcctccttcagccccatg
tccctccctggagcttccactgcatcacctggtgctgctgcctacccaagtctcaccaat
cgtggatccaactttgctccagagactggacagactgcaggacaattccagacacggaca
gcagagggtgtgggtgtctgggcacattggcagggccagcagcctcatcatcgttcaagt
tctaatgagcaacatgttcaacagccatcagcacagcaacctggccagccagaggtcttc
caggagatgctgtccatgctgggagaccagagcaacagttacaacaatgaagaatttcct
gatctaactatgtttccctccttttcagaatag
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integrated database retrieval system
