Phocoena sinus (vaquita): 116750425
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Entry
116750425 CDS
T07759
Symbol
CD180
Name
(RefSeq) CD180 antigen
KO
K06555
CD180 antigen
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psiu04090
]
116750425 (CD180)
CD molecules [BR:
psiu04090
]
Proteins
116750425 (CD180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_11
LRR_14
LRR_6
LRR_EndoS
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
116750425
NCBI-ProteinID:
XP_032480962
Ensembl:
ENSPSNG00000009061
UniProt:
A0A8C9E1E4
LinkDB
All DBs
Position
3:119712730..119726815
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AA seq
661 aa
AA seq
DB search
MAPRVGCFLLAVLISASCKVVTSSDPMCTEREANKTYNCENLGLREIPDTLPNTTEFLEF
GFNFLPAIQNITFSRLINLIFLDLTRCQINWVHEDTFQNHHQLNTIVLTGNPLIFMAETS
LTGPKLLKHLFLTQTGISSLEFIPVHNLENLESLHLGSNCISSINLPENFPTRNLKVLDF
QNNAIHYISSKDINALEQATNLSLNFNGNDIKGIEPGAFNSKIFQSLKFGGSLNLSVILK
GLQNSTIQSLWLGTFEDTDDQHLTSATFEGLCDMAVESINLQKHHFDGFSPSTFRCFTGL
QELDLTATHLKGLPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLTDLYVKGNRKRLD
LGARCLEKLENLQKLDLSHSDIEASDCCNLQLKNLPHLQYLNLSYNEPLGLEDQAFKECP
WLELLDLAYTHLRVKASQSPFRNLHLLRVLNLSHCLLDTSNRHLLEGLLDLRHLNVQGNR
FQDGSISKTNLLQTVSSLEILILSSCDLLSIDQQAFHGLGKMSHLDLSHNSLTGDSMDAL
SPLKGIYLNLAANNIRIIPFHLLPTLSQQSTINLSHNPLDCTCSNIHFITWYKENLHKLE
GSEETVCANPPPLRGVKLSDVKLSCGMTGMGIFFLVVFVFLLIILLIFSVKFLLRWKYQH
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggctccccgcgtcggctgcttcctgttggcagtgctgatttctgccagctgtaaagtc
gtcacctcctcagatccaatgtgcactgagagagaagccaacaagacatataactgtgaa
aatttaggtctcagagagattcctgacactctaccaaatacaacagaatttttggaattc
ggctttaacttcttgcctgcaattcaaaatataaccttcagcagactcataaatcttatc
ttcttggatttgaccaggtgccagattaactgggtacatgaagatacttttcaaaaccat
catcaactgaacaccattgtgttaactggaaatcccctgatattcatggcagaaacgtca
cttaccgggcccaagttgctgaagcatcttttcttaacccaaacaggaatatccagtctt
gagtttatcccagtgcacaacctggaaaacttggaaagtttgcatcttggaagcaactgt
atttcctccattaatctcccagaaaacttcccaacacggaatctgaaagtcctggatttt
cagaataatgctatacactacatctctagtaaagacataaacgctctggaacaggccacg
aacctaagcctcaacttcaatggcaatgacattaaaggcattgagcctggggctttcaat
tcaaaaatctttcaaagtttgaaatttggagggtctctcaacttatctgttatattgaaa
ggtctacagaactctactattcagtctctttggctggggacatttgaggacactgatgac
caacacctcacttcagccacatttgagggactttgtgacatggctgttgagagcatcaac
ctacaaaagcaccatttcgatggcttctcaccttctacatttcggtgcttcactggactc
caggagttggatctgacggcaactcacttgaaaggattaccctctggaattgagggtatg
aactctctcaagaaattagttctcaatgcaaatagttttgaccaattgtgtcaaatcaat
gctgccagtttcccatcccttacagacctctatgtcaaaggcaacaggaagagacttgac
ctcggtgccaggtgtttggaaaaactagaaaatcttcagaagcttgatttaagtcacagt
gatattgaggcttctgactgttgcaatctgcaactcaaaaacctgccccacttgcaatac
ttaaacctgagctacaatgagccccttggtctcgaggatcaggcgttcaaagaatgtcct
tggctagaactactggatttggcctatacccacctgcgtgttaaggcttcacaaagtcct
ttccgaaacctccatctcctgcgggttctgaatctctctcactgcctccttgataccagc
aatcggcaccttctagaaggcctgctggatctccggcatctgaacgtacaagggaatcgc
tttcaagatgggagcatctcaaagaccaacctacttcagacagtgagtagcttggagatt
ctgattttatcctcttgtgatctcctctccatagaccagcaagcattccacggccttggg
aaaatgagccacttagacttaagccacaacagcctgacaggcgatagcatggatgctctc
agccctcttaaggggatctacctcaatctggccgccaataacattcgcatcatcccattc
catctcctccccaccttgtctcagcagagcaccattaatttaagtcacaatcccctggac
tgcacttgctccaatatccatttcataacatggtacaaagaaaacctgcataaactcgag
ggctcggaggagaccgtgtgtgcaaatcccccacctttaaggggagttaagctgtctgat
gtcaaactgtcttgtgggatgacgggtatgggcattttctttcttgtagtattcgtattc
ctgctcatcattctgctcatattttcagttaaattccttcttaggtggaaataccagcac
atttag
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