Phocoena sinus (vaquita): 116750455
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Entry
116750455 CDS
T07759
Symbol
SBNO2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116750455 (SBNO2)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116750455 (SBNO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
116750455
NCBI-ProteinID:
XP_032481016
Ensembl:
ENSPSNG00000012454
LinkDB
All DBs
Position
3:complement(769327..813125)
Genome browser
AA seq
1404 aa
AA seq
DB search
MPLRPGSWSPPMLAVGPTMDGEFPPHEPPPAGSVLYSPPPLQTPLCGPSVQNAMLHYPWW
NSFSPTPYPAFSSESHQFMNSSFIVGQPCVDTSYGPAAATPSFPPKSSDFPQDSSYLDDL
SNASIFSSSVDSLSDIADTPDFLPADSLSQVPTIWDVSTGPSTHDKLFLPSGPFTGLEDP
VSSLSSTPLLVSYQSQSHPEEDDEAEEDEAEELGHAETYADYVPSKSKLGKQHPDRVVET
STLSSVPPPDITYALALASSDSGALSALQLEAITYACQQHEVLLPGGQRAGFLIGDGAGV
GKGRTVAGIILENYLRGRKKALWFSVSNDLKYDAERDLRDIAAPGIAVHALSKIKYGDNT
TSEGVLFATYSALIGESQAGGQHRTRIRQILEWCGEAFDGVIVFDECHKAKNASSTKMGK
AVLDLQNKLPLARVVYASATGASEPRNMIYMSRLGIWGEGTPFRTFEEFLHAIEKRGVGA
MEIVAMDMKVSGMYIARQLSFSGVTFRIEEIPLAPAFEHIYNRAALLWAEALGVFQQAAD
WIGLESRKSLWGQFWSAHQRFFKYLCVAAKVRRLVELAREELARDKCVVIGLQSTGEART
REVLGEKEGQLDGFVSAAEGVFLSLIQKHFPSTKRKRERGPGSKRKNRATRTKAQGQAAV
TPGCSPAGRPRGRGAKVPRLACDAAGVIRVSDDSSTESDGGLDSDFHSSPESLMDDDVVI
VDAIGLPADDRGPLCPPPRDLHGPGVLERVERLKQDLLAKVQVLGRELPVNTLDELIDQL
GGPECVAEMTGRKGRVVSRSDGTVAFESRAEQGLSIDHVNLREKERFMSGEKLVAIISEA
SSSGISLQADRRVPNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVSAPEYIFLISELAG
ERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGARALSCVLTTILSQTESKV
PLPQGYPGGDAAFFRDMKQGLLSVGIGGRESRSGCLDVEKADCSISKFLNRILGLEVHKQ
NTLFQYFSDTFDHLIAADKKEGKYDMGILDLAPGIDEIYEESQQVFLAPGHPQDGQVVFY
KISVDRGLKWEEAYARSLELMGTHDGFYLSYKVRGNKPSCLLAQQNRGKLFTVYKPNIGR
QSQLETLDSLCRRFHRVTAEEAREHWESSYTFSLTHCSHTTWNRHCRLVQEGKDCAQGLR
LRHHYMLCGALLRVWGRIAAVMADVTSSSYLQIVRLKTKDKKKQVGIKIPEACVRRVLQE
LQLMDADVKRKQARARGLPALPPAPRPLALPCGPGEVLDLTYSPPAQAFPPPSPFAFPAP
APGPGGLLLGVPDAPADPAALLHQGCDINFKEVLEDMLRSLNAAPPPEPPGLLGAGGGAA
GAPEGSGGAERQSVIQFSPPFPNS
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcggcccggctcgtggagccccccgatgctggcagtggggcccaccatggac
ggggagttccctccgcatgagcctccaccagccggcagcgtcctgtacagcccgccgccc
ctgcagaccccgctgtgcgggcccagcgtccagaatgccatgctgcattacccctggtgg
aacagcttctcgcccacgccatacccagccttctccagcgaaagccaccagttcatgaac
tcctccttcattgtgggccagccctgcgtggacaccagctatggtcctgcagccgccacc
cccagcttcccgccaaagagcagcgactttcctcaggactcctcgtacctcgatgacctc
tccaatgcctccatcttctcctcgtccgtggactccctctcggacatcgcagacacacct
gacttcctgcccgccgacagcctcagccaggtgcccaccatctgggacgtgagcactggc
ccctccacccacgacaagctgttcctgcccagcgggccatttacaggccttgaggaccct
gtgtcctctctctccagcaccccacttctcgtcagctaccagtctcagagtcaccccgag
gaggacgacgaagctgaggaggatgaggcggaggagctgggccacgcggagacctacgcc
gactacgtgccatccaagtccaagctcgggaagcagcacccggaccgcgtggtggagacc
agcactctgtccagcgttccgccgccggacatcacctacgccctcgccctggcctcctcc
gacagcggagccctttccgccttgcagctagaggccatcacctacgcctgccagcaacac
gaggtcctgctccccggtgggcagcgcgcgggcttccttatcggcgatggcgcgggtgtg
ggcaagggccgcacggtggccggcatcatcctggagaactacctgcggggcagaaagaag
gccttgtggttcagcgtctccaatgatctcaagtacgatgcggagcgcgaccttcgggac
atcgccgcccctggcatcgcggtgcacgcgctgagcaagatcaagtacggcgacaacact
acctcagagggcgtcctctttgccacctactccgccctgatcggggagagccaggcaggc
gggcagcatcgcacgcgcatccggcagatcctggagtggtgtggggaggccttcgacggc
gtgattgtgtttgacgagtgccacaaagccaagaacgccagctccaccaagatgggcaag
gccgtgctggacctgcagaacaagctgcccctggccagggtggtctacgccagcgccaca
ggtgcctctgagccccggaacatgatctacatgagccgcctgggtatctggggcgagggc
acacccttccggaccttcgaggaatttctgcatgccatcgagaagaggggtgtgggcgcc
atggagatcgtggccatggacatgaaggtcagcggcatgtacatcgcacgccagctcagc
ttctctggcgtcaccttccgcatcgaagagatcccgctggccccggccttcgagcacatc
tacaaccgggcggccctgctgtgggccgaggccctgggcgtgttccagcaggcagccgac
tggatcggcctggagtcacgcaagtccctgtggggccagttctggtcggcccaccagcgc
ttcttcaagtacctatgtgttgccgccaaggtgcgccggctggtggagctggcccgggag
gagctggccagggacaagtgcgtggttatcgggctgcagtccacgggtgaggcgcgtacc
cgggaggtgctgggcgagaaggagggccagcttgatggcttcgtgtccgctgccgaaggc
gtctttctgtcgctaattcagaagcactttccttcaaccaagaggaagcgagagagagga
ccgggcagtaagcgaaaaaaccgtgccaccaggacaaaggcgcagggccaggcggcagtg
acccctggctgctctcctgcagggcggccgcggggccgtggggccaaggtgcccaggctg
gcgtgtgacgcagcgggcgtgatccgcgtcagtgacgacagcagcacggagtcggacggc
ggcctggacagcgacttccactcctcccccgagtccctgatggacgatgacgtggtcatc
gtggacgccatcgggctcccggccgacgaccgcggccccctgtgtcccccaccgcgggac
ctgcacggccccggtgtcctggagcgggtagagcggctgaagcaggacctgctggccaag
gtgcaggtgctgggccgggagctgcccgtcaacaccctggacgagctcattgaccagctc
gggggtccggagtgcgtggcggagatgactggcaggaagggccgcgtggtgtccaggtcc
gacgggacggtggccttcgagtcccgggcggagcagggcctctccatcgaccacgtgaac
ctcagggagaaggagcgcttcatgagcggagagaagctcgtggccatcatctcggaggcc
tccagctccggcatctccctccaagccgaccgccgggtaccgaaccagcggcgccgggtg
cacatgacgctggagctgccctggagcgccgaccgggccatccagcagtttggccggacc
caccgctccaaccaggtctccgcgcccgagtacatcttcctcatctcagagctggccggg
gagcgcaggtttgcctccatcgtggccaagaggctggagagcctgggggctctgacccac
ggggaccgccgagccaccgagtcccgtgacctgagcaagtacaactttgagaacaagtac
ggcgcccgggcgctcagctgcgtcctcaccaccatcctaagccagacagagagcaaggtg
ccgctgccccagggctaccctggaggggacgccgccttcttccgtgacatgaagcagggg
ctgctgtctgtcggcatcggcgggcgcgagtcccggtccggctgcctggacgtggagaag
gcagactgctccatcagcaagttcctcaaccgcatcctggggctggaggtgcacaagcag
aacacgctcttccagtacttctccgacaccttcgaccacctcatcgccgccgacaagaag
gagggcaaatacgacatgggcatcctggacctggcccctggcattgacgagatctacgag
gagagccagcaggtgttcctggcccccgggcacccgcaggacgggcaggtggtcttctac
aagatcagcgtggaccgcggcctgaagtgggaggaggcctatgcccggtcgctggagctg
atgggcacccacgacggcttctacctctcctacaaggtccgtggcaacaagcccagctgc
ctgctggcccagcagaaccgcggcaagctcttcaccgtgtacaagcccaacatcgggagg
cagagccagctggagaccttagacagcctgtgccggaggtttcaccgggtgacagcggag
gaggccagagagcactgggagagcagctacaccttctcgctgactcactgcagccacacc
acatggaaccggcactgccggctggtgcaggagggcaaggactgcgcgcagggcctgagg
ctgcgacaccactacatgctgtgcggggccctgctgcgcgtgtggggtcgcatcgccgcc
gtcatggccgacgtcaccagcagcagctacctgcagatcgtgcgcctcaagaccaaggac
aagaagaagcaagttggcatcaagatccccgaggcctgtgtgcgccgcgtcctgcaggag
ctgcagctcatggacgccgatgtgaagcgcaagcaggcgcgcgcccggggtctccccgcg
ctgccgcccgccccacgcccgctcgcgctgccctgcggccccggcgaggtcctggacctc
acgtacagtccaccggctcaggccttcccgccgccctcgcccttcgccttcccggccccg
gcccccggccccggcggcctgctgctgggtgtccccgacgccccggctgaccccgcggcg
ctcctgcaccagggttgcgacatcaacttcaaggaggtgctggaggatatgctgcgctcc
ctcaatgccgcgccgccccctgagccccccggcctgctgggcgccggcggcggggcagca
ggcgcgccggagggcagcgggggcgccgagcggcagagcgtcatccagttcagccccccc
ttccccaactcctag
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