KEGG   Phocoena sinus (vaquita): 116750523
Entry
116750523         CDS       T07759                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03410  Base excision repair
psiu04140  Autophagy - animal
psiu04217  Necroptosis
psiu04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116750523
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    116750523
  09143 Cell growth and death
   04217 Necroptosis
    116750523
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    116750523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psiu03036]
    116750523
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116750523
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psiu04147]
    116750523
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    116750523
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     116750523
   MMR (mismatch excision repair)
    Other MMR factors
     116750523
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   116750523
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 116750523
NCBI-ProteinID: XP_032481143
LinkDB
Position
3:complement(81631453..81632112)
AA seq 184 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKFSERWKTMSAKEKGKF
EDMAKANNAHYEREMKTYIPPKGETKKKFKNPNAPKRPPSAFFLFCSEYRPKVKGEHPGL
SIGDVAKKLGEMWNNTAAGDKQPYEKKTAKLKEKCEKDIAAYRAKGKPDAAKKGVVKAER
HFAI
NT seq 555 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccagatgcttccgtcaacttctcagag
ttttctaagaagttctcagagaggtggaagaccatgtctgctaaagagaaaggaaagttt
gaagacatggcaaaggcgaacaacgcccattatgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaagaatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaagtcaaaggagaacatcctggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcaggtgac
aagcagccttatgagaagaagactgctaaactgaaggaaaagtgtgaaaaggatattgct
gcataccgagctaaagggaagcctgatgcagcaaaaaagggagtcgtcaaggctgaaaga
cattttgcaatctga

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