Phocoena sinus (vaquita): 116750523
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Entry
116750523 CDS
T07759
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03410
Base excision repair
psiu04140
Autophagy - animal
psiu04217
Necroptosis
psiu04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116750523
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116750523
09143 Cell growth and death
04217 Necroptosis
116750523
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
116750523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116750523
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116750523
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116750523
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
116750523
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116750523
MMR (mismatch excision repair)
Other MMR factors
116750523
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116750523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
116750523
NCBI-ProteinID:
XP_032481143
LinkDB
All DBs
Position
3:complement(81631453..81632112)
Genome browser
AA seq
184 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKFSERWKTMSAKEKGKF
EDMAKANNAHYEREMKTYIPPKGETKKKFKNPNAPKRPPSAFFLFCSEYRPKVKGEHPGL
SIGDVAKKLGEMWNNTAAGDKQPYEKKTAKLKEKCEKDIAAYRAKGKPDAAKKGVVKAER
HFAI
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccagatgcttccgtcaacttctcagag
ttttctaagaagttctcagagaggtggaagaccatgtctgctaaagagaaaggaaagttt
gaagacatggcaaaggcgaacaacgcccattatgaaagagaaatgaaaacttatatccct
cctaaaggggaaacaaaaaagaagttcaagaatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaagtcaaaggagaacatcctggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcaggtgac
aagcagccttatgagaagaagactgctaaactgaaggaaaagtgtgaaaaggatattgct
gcataccgagctaaagggaagcctgatgcagcaaaaaagggagtcgtcaaggctgaaaga
cattttgcaatctga
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integrated database retrieval system