Phocoena sinus (vaquita): 116750541
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Entry
116750541 CDS
T07759
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03010
Ribosome
psiu04120
Ubiquitin mediated proteolysis
psiu04137
Mitophagy - animal
psiu04140
Autophagy - animal
psiu05012
Parkinson disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05167
Kaposi sarcoma-associated herpesvirus infection
psiu05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
116750541
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116750541
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116750541
04137 Mitophagy - animal
116750541
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
116750541
05167 Kaposi sarcoma-associated herpesvirus infection
116750541
09164 Neurodegenerative disease
05012 Parkinson disease
116750541
05022 Pathways of neurodegeneration - multiple diseases
116750541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
psiu03011
]
116750541
04121 Ubiquitin system [BR:
psiu04121
]
116750541
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116750541
Ribosome [BR:
psiu03011
]
Ribosomal proteins
Eukaryotes
Small subunit
116750541
Archaea
116750541
Ubiquitin system [BR:
psiu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
116750541
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116750541
Exosomal proteins of colorectal cancer cells
116750541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
Ubiquitin_5
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
116750541
NCBI-ProteinID:
XP_032481171
LinkDB
All DBs
Position
3:164315563..164368001
Genome browser
AA seq
184 aa
AA seq
DB search
MTWPPPKAPSPESIVLEAFGSSICSGTAANVQIFVKTLTGKTITLEVEPSDAVENVKAKI
QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKSYTTPKKN
KRKRKKVKLAVLKYYKVDENGKISLLHRECPSNECGAGVFMASHFDRHCGKCCLTYHFNK
PEDK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgacctggccacctcccaaggccccatctcctgagagcatcgtgctggaagcttttgga
tcctccatctgcagtggcaccgccgccaatgtgcagattttcgtgaagaccctgacaggg
aagaccatcactctcgaggtcgaaccctcggatgcagtagaaaacgtaaaggccaagatc
caggacaaggaaggaattcctcctgaccagcaaagactgatctttgcaggcaagcaactg
gaagatggacgtactttgtctgactacaacattcagaaggagtccactcttcatcttgta
ttgaggcttcgtggtggtgctaagaaaaggaagaagtcgtacaccactcccaagaagaac
aagcgtaagagaaagaaggttaagctggctgtcctgaaatactataaggtggatgagaat
ggcaaaatcagtctccttcatcgggagtgcccttcaaatgaatgtggtgctggagttttt
atggccagccactttgacagacattgtggcaaatgttgtctgacctatcatttcaacaaa
ccagaagacaagtaa
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integrated database retrieval system
