KEGG   Phocoena sinus (vaquita): 116750626
Entry
116750626         CDS       T07759                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03020  RNA polymerase
psiu03420  Nucleotide excision repair
psiu04623  Cytosolic DNA-sensing pathway
psiu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116750626 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116750626 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    116750626 (POLR2E)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    116750626 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psiu03021]
    116750626 (POLR2E)
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116750626 (POLR2E)
Transcription machinery [BR:psiu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     116750626 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     116750626 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     116750626 (POLR2E)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116750626 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 116750626
NCBI-ProteinID: XP_032481401
Ensembl: ENSPSNG00000012238
UniProt: A0A8C9C712
LinkDB
Position
3:complement(752122..759714)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaagaggagacgtaccggctgtggaaaatccgcaagaccatcatgcagctg
tgccacgatcgtggctacctggtgacccaggacgagctggaccagacgctggaggagttc
aaggcccagtttggggacaagcccagtgaagggaggcctcggcgcacagacctcacggtg
ctggtggcccacaacgatgaccccactgaccagatgttcgtcttcttcccagaggagccc
aaggtgggcatcaagaccatcaaggtgtactgccagcggatgcaggaggagaacatcacg
cgggccctcattgtggtacagcagggcatgacaccctccgccaagcagtccctggtcgac
atggcccccaagtacatcctggagcagtttctgcagcaggagctgctcatcaacatcacg
gagcatgagctggtcccagagcacgttgtcatgaccaaggaggaggtgacggagttgctg
gcccggtataaactccgagagaaccagctgcccaggatccaggcgggagaccccgtggca
cgttactttgggataaagcgagggcaggtggtgaagatcatccggcccagcgagactgca
ggcaggtacatcacctaccggctggtgcagtag

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