Phocoena sinus (vaquita): 116750637
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Entry
116750637 CDS
T07759
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03082
ATP-dependent chromatin remodeling
psiu04217
Necroptosis
psiu04613
Neutrophil extracellular trap formation
psiu05034
Alcoholism
psiu05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116750637
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116750637
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
116750637
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
116750637
09165 Substance dependence
05034 Alcoholism
116750637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116750637
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116750637
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
116750637
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116750637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
DUF1764
Clp_N
Motif
Other DBs
NCBI-GeneID:
116750637
NCBI-ProteinID:
XP_032481421
Ensembl:
ENSPSNG00000019193
LinkDB
All DBs
Position
3:59346912..59427329
Genome browser
AA seq
372 aa
AA seq
DB search
MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
IYVQEMAKLDAN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccggggtgggaagaagaagtccaccaagacctcccggtccgccaaggcagga
gtcatcttccctgtgggccggatgctgcggtacatcaagaaaggccaccccaagtacagg
atcggagtgggcgcgcctgtgtacatggccgccgtcctggagtacctgacagcggagatt
ctggagctggctggcaatgcagcaagagacaacaagaagggccgggtcacgccccggcac
atcctgctggccgtggccaacgatgaagagctgaatcagctgctaaaaggagtcaccatc
gccagcgggggagtgttaccaaacatccatccggagttgctagcgaagaaacgaggatcc
aaagggaagttggaagccatcatcacaccacccccagccaaaaaggccaagtctccgtcc
cagaagaagcccgtgtctaagaaagcagggggcaagaaaggggcccggaaatccaagaag
aagcagggagaagtcagcaaggcagccagcgctgacagcacgaccgagggcacacccgcc
gatggcttcactgtgctctccaccaagagcctcttcctcggccagaagctgaaccttatt
cacagtgaaatcagtaatttagccggctttgaggtggaggccataatcaatcctaccaat
gctgacattgaccttaaagatgacctaggaaacacgctggagaagaagggtggcaaggag
tttgtggaagctgttctggaactccggaaaaagaacgggcccttggaagtagctggagcc
gctgtcagcgcaggccatggcctgcccgccaagtttgtgatccactgtaacagtcccgtc
tggggtgcagacaagtgtgaggaacttctggaaaagacagtgaagaactgcttggccctg
gcggatgacaagaagctgaagtccatcgcctttccatccatcggcagtggcaggaacggt
tttccgaagcagacggcagctcagctgatcctgaaggccatctccagttacttcgtgtca
acaatgtcctcttccatcaaaacggtgtattttgtgctttttgacagcgagagtataggc
atctacgtgcaggaaatggccaagctggacgccaactag
DBGET
integrated database retrieval system