KEGG   Phocoena sinus (vaquita): 116750637
Entry
116750637         CDS       T07759                                 
Name
(RefSeq) core histone macro-H2A.1 isoform X1
  KO
K11251  histone H2A
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03082  ATP-dependent chromatin remodeling
psiu04217  Necroptosis
psiu04613  Neutrophil extracellular trap formation
psiu05034  Alcoholism
psiu05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116750637
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    116750637
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    116750637
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    116750637
  09165 Substance dependence
   05034 Alcoholism
    116750637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psiu03036]
    116750637
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psiu04147]
    116750637
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    116750637
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116750637
SSDB
Motif
Pfam: Macro Histone_H2A_C Histone CBFD_NFYB_HMF DUF1764 Clp_N
Other DBs
NCBI-GeneID: 116750637
NCBI-ProteinID: XP_032481421
Ensembl: ENSPSNG00000019193
LinkDB
Position
3:59346912..59427329
AA seq 372 aa
MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
IYVQEMAKLDAN
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgtccagccggggtgggaagaagaagtccaccaagacctcccggtccgccaaggcagga
gtcatcttccctgtgggccggatgctgcggtacatcaagaaaggccaccccaagtacagg
atcggagtgggcgcgcctgtgtacatggccgccgtcctggagtacctgacagcggagatt
ctggagctggctggcaatgcagcaagagacaacaagaagggccgggtcacgccccggcac
atcctgctggccgtggccaacgatgaagagctgaatcagctgctaaaaggagtcaccatc
gccagcgggggagtgttaccaaacatccatccggagttgctagcgaagaaacgaggatcc
aaagggaagttggaagccatcatcacaccacccccagccaaaaaggccaagtctccgtcc
cagaagaagcccgtgtctaagaaagcagggggcaagaaaggggcccggaaatccaagaag
aagcagggagaagtcagcaaggcagccagcgctgacagcacgaccgagggcacacccgcc
gatggcttcactgtgctctccaccaagagcctcttcctcggccagaagctgaaccttatt
cacagtgaaatcagtaatttagccggctttgaggtggaggccataatcaatcctaccaat
gctgacattgaccttaaagatgacctaggaaacacgctggagaagaagggtggcaaggag
tttgtggaagctgttctggaactccggaaaaagaacgggcccttggaagtagctggagcc
gctgtcagcgcaggccatggcctgcccgccaagtttgtgatccactgtaacagtcccgtc
tggggtgcagacaagtgtgaggaacttctggaaaagacagtgaagaactgcttggccctg
gcggatgacaagaagctgaagtccatcgcctttccatccatcggcagtggcaggaacggt
tttccgaagcagacggcagctcagctgatcctgaaggccatctccagttacttcgtgtca
acaatgtcctcttccatcaaaacggtgtattttgtgctttttgacagcgagagtataggc
atctacgtgcaggaaatggccaagctggacgccaactag

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