Phocoena sinus (vaquita): 116750675
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Entry
116750675 CDS
T07759
Symbol
CILP2
Name
(RefSeq) cartilage intermediate layer protein 2
KO
K24436
cartilage intermediate layer protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116750675 (CILP2)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
116750675 (CILP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
TSP_1
I-set
Ig_2
TSP1_spondin
ig
V-set
CarbopepD_reg_2
TSP1_CFP_C
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
116750675
NCBI-ProteinID:
XP_032481510
LinkDB
All DBs
Position
3:complement(10816346..10825341)
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AA seq
1170 aa
AA seq
DB search
MDFLLASEKTGARRVEGRFKLQARFQEALPDVENRGWAKEGTSSRRRGDAGQPEGGAPAA
ARPAGVRPECTAELGPSLRLSDLAMASLQILLCLCVAAAHLAGTRGTTTPEEPMVTAWGL
EGSWLHPGQPSPALEDWEEASEWTSWFNVDHPGGDGDFESLAAIRFYYGPARVCPRPLAL
EARTTDWALPSDVGERVHLNPTRGFWCLNREQPRGRRCSNYHVRFRCPLEATWGAWGPWG
PCSGSCGPGRRLRRRRCPSPAADACPGRPLEAQKCVRPTCPGMAQAQANSSISAVVTVVL
NKLEKPYLVKHPESRVREAGQNVTFCCKALGTPMPKKYSWFHNGTLLDRRTHRYGTHLEL
HGLHPDQAGTYHCKAWNDAGAVRSGTAQLTVLAPGQPACDPQPREHLIKLPDDCGQPGSG
PIYLDVGLCPDTLCPSPAGSSPRCGDAGSRCCSVHRLESRKIHCSGYILPVKIVAECGCR
KCLPPRGLIRGRVVAAESREPLCFARILLGREPIGFTSYQGDFTIEVAPSTQRLVITFVD
PSGQFVDTVRVLPFDPQGAGVYHEVKAMRKKAPVILDASQSNTISLGELEDEAPLGELVI
PPRAFRRADGEPYAGAVEARVTFVDPRNVTSAAAAPTDLRFVDSDGELAPLRTYGMFSVD
LRAAGSAEQLQTGPVAVRVAASQIRMAGHVEALKLWSLNPDTGLWEEESGFQRERSAASR
VRREERVFLVGNVEIRERRLFNLDVPERRRCLVKVRAYANDKFNPNEQVEGVVVTLVNLE
PAPGFSANPRAWGRFDSAVTGPNGACLPAFCDADRPDGYTALVTATLGGEELEPAASRPR
PRPATVGVAQPYLDKLGYRRTDHDDPSLKRNGFRINLAKPRSGDPAEANGPVYPWRNLRE
CQEAPVTASHFRFARVEMDKYEYNVVPFREGVPASWTGDLLAWWPNPQEFRACFLKVKIQ
GPQEYMVRSHNSGGSHPRTRGQLYGLRDDRSVRDPQRPSTSAACVEFKCSGMLFDQRQVD
RTLVTIMPQGSCRRVAVNGLLQDYLTRHPPAAPADDLAVFSMLAPLDPLGHNYGVYTVTD
QSPRLAKEIAIGRCFDGSSDGFSREMKADAGTAVTFQCRERPEGRPSLFQRLLESPLAAL
GDIRREMGEVGRAQARASGPLRTRRGRVQQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggacttcttgctggcctcggagaaaactggagccagaagagtggagggtagattcaag
cttcaggctcgattccaggaggcacttcccgacgtggagaacagagggtgggctaaggag
gggacttccagccggcgacgaggggacgcaggccagcccgagggcggagccccagcagcc
gccagacccgcgggagtccgacccgagtgcacagcggagctgggaccctccctccgactt
tcggacctggccatggcgtcactgcagatactgctctgcctctgtgtcgccgccgcgcac
ctggcggggacccgaggcaccaccacccctgaggagcccatggtgactgcgtggggcctt
gaaggttcatggctgcaccctggccagccctcaccagccctggaggactgggaagaggcc
agcgagtggacgtcctggttcaacgtcgaccacccgggaggcgacggtgacttcgagagc
ttggctgcgatccgcttctattacgggccggcgcgcgtgtgcccgcggccgctggcgctg
gaggcgcgcaccacagactgggccctgccgtcagacgtcggcgagcgcgtacacttgaac
cccacgcgaggtttctggtgcctcaaccgcgagcagccccgaggccgccgctgctccaac
taccacgtgcgcttccgctgcccgctcgaggccacgtggggtgcgtggggcccgtggggt
ccttgttcggggagctgcgggccaggccgtcgcttgcgccgccgccgctgcccaagccct
gctgcggatgcgtgtcctgggcgtcccctggaggcgcagaagtgtgtgaggcctacatgt
ccaggcatggcccaggcccaggccaacagctccatctctgctgtggtcactgttgtcctt
aataagttggagaagccctatctggtgaagcaccctgagtcccgagttcgagaggctggc
cagaatgtgaccttctgctgcaaagccttgggcacccccatgcccaagaaatactcctgg
ttccacaacgggaccctgctggacaggcgaacgcacaggtacgggacccacctggagctg
catgggcttcacccagaccaggcaggcacctatcactgcaaagcgtggaatgatgccggg
gccgtgcgatcgggcactgcccaactcaccgtgcttgccccaggccagccagcctgtgac
ccccagccccgagaacacctgatcaagcttccagacgactgtggtcagccaggcagcggc
cccatctacctggacgtaggcctttgccctgacaccctctgccccagccctgcaggctcg
agcccccgatgtggggatgcaggatcccgctgctgctcggtgcaccggctggagagcagg
aagatccactgctctggctacatcctcccagtaaagatagtggctgaatgtggctgccgg
aaatgtctgccccctcgggggctgatccggggacgtgtggtggccgctgagtctagggag
cccttgtgctttgctcggatcctcctgggccgggagcccattggcttcacatcctaccag
ggtgacttcaccattgaggtggcaccttccactcagcggctggtgattactttcgtggac
cccagtggccagttcgtggacactgtcagggtcctgccttttgaccctcaaggtgcgggc
gtgtaccatgaggtcaaggccatgcgcaagaaagcccctgtcatcttagatgccagccag
agcaacacgatatccctcggggagctggaggacgaagcccccttaggcgagctggtcatc
ccgccgagagccttccgcagagctgatggtgaaccctatgcaggggctgtggaggcccgg
gtgacatttgttgacccccgaaatgtcacctcggcggctgcggcccccactgacctgcga
tttgtggacagtgacggggagttggctccactgcgcacctacggcatgttctcggtggac
ctccgtgctgccggctccgcagagcagctgcagaccgggccggtggccgtgcgtgtggcc
gccagccagatccgaatggccggccacgtggaggccctgaagctgtggtcgctgaaccct
gacacgggcttgtgggaagaggagagcggcttccagcgtgagaggtcggcggcctcacgg
gtccgccgggaggagcgggtcttcctggtgggcaacgtggagatccgggagcggcgtctg
ttcaacctggacgtgcctgagcgccgccgctgcttggtgaaggtgcgcgcctacgccaac
gacaagttcaaccccaacgagcaggtggagggcgtggtggtcacgctggtcaacctggag
cctgcccccggcttctcggccaacccccgcgcctggggccgcttcgacagcgccgtcact
ggtcccaacggggcctgcctccccgccttctgcgatgctgaccggccagacggctacacc
gccctggtcacggccaccctgggcggggaggagctggagcccgccgcatcccggccccgc
ccacgcccggccaccgtgggcgtggcccagccctacctagacaagctgggttaccgccgc
accgaccacgatgacccctccctcaaacgcaatggcttccgcatcaacctcgccaaaccc
aggtccggcgaccccgccgaggccaacggccccgtgtacccgtggcgcaacctgcgggag
tgtcaggaggccccggtgaccgccagccacttccgctttgctcgcgtggagatggacaaa
tacgagtataacgtggtccccttccgcgagggcgtgccggcctcctggactggagatctc
ctggcctggtggcccaacccgcaggagttcagagcctgcttcctcaaggtgaagatccag
ggtccccaggaatacatggtccgctcccacaattcggggggcagccaccctcggacccgg
ggccagctctacggtctgcgggatgaccggagtgtccgagatccccagcgccctagcaca
tctgccgcctgcgtggagttcaagtgcagcgggatgctgttcgaccagcgtcaggtggac
aggacgctggtgaccatcatgccccagggcagctgccggcgcgtggcggtcaacggactc
ctgcaggattacttgacccggcacccccctgctgcacctgccgatgacctggctgtcttc
tccatgctggccccgctggaccctctgggtcacaactatggtgtctatacagtcactgac
cagagcccaaggctggccaaggagattgccatcggccgctgcttcgatggctcctctgat
ggcttctccagggagatgaaggccgatgctggcacagccgtcacctttcagtgccgggag
agaccagagggccggccgagcctcttccagaggctgctggagtccccattggcagctctt
ggtgacatccgcagggagatgggtgaggtgggccgggcacaggcacgagcctcaggtccc
ctgcgcacccgccgtggcagggtccagcagtga
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