Phocoena sinus (vaquita): 116750755
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Entry
116750755 CDS
T07759
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116750755 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116750755 (TTC37)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
116750755 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_8
TPR_14
TPR_17
TPR_11
TPR_12
TPR_CcmH_CycH
ANAPC3
Sel1
TPR_9
Fis1_TPR_C
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_5th
TPR_30
HEAT_Nup120
TPR_6
TPR_15
TPR_5
TPR_20
Retrotran_gag_2
BTAD
DUF7017
Motif
Other DBs
NCBI-GeneID:
116750755
NCBI-ProteinID:
XP_032481705
Ensembl:
ENSPSNG00000000523
LinkDB
All DBs
Position
3:95957105..96045935
Genome browser
AA seq
1568 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHVEVARTWHKLIKTRQEGGAENQELHQLWKKLTQLLAESTEDQNNETQQ
LLLTAFENALDLSDKIPSEDHQVLYRHFIQCLSKFPHETARLKKACEGMINIYPTVQYPL
EVLCLHLIETGSLTDEGEQYCCRLVEMDSKSGLGLIGLGIKALQDKKYEDAVRSLTEGLK
ESPLCTAGWYHLAEAQVRMHKPKEAVLSCNQALKNIDNLGVSGGNLHQKNLCLHLKAEAL
IKLSDYESSEEAIRTLDQVSDANNIPGLLVLKGLAYLNKGSLDEASKIMEDLLSSYPDLA
EAHALEALIHFTKKDYLQAEKCFQLALEKDAEVAEYHYQLGLTYWSMGEETRKDKTKALT
HFLKAAKLDTYMGKVFCYLGHYYRDVVGDRNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGAAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAVAQYQLIIK
KKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTRALQHRADVSCLWKLV
GDACTSLYAVSLSKVNVSVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLAETGSKSNDLPELLEKSLHCLKKAVRLDSNNHLYWNALGVVSCYSGI
RNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANEKIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRDTELYQYNILQMN
AIPAAQVVLSKYTDIFGFPERIQNYAPAFTMLGYLNEHLQLKKEAADAYQRAILLLQTAE
DTDAYNVTIRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFGLALFMKGLYKESSKAY
ERALSTVESEQDKAHILTALAIAEYKQGKMDVAKTLLFKCSILKEPTKESLQALCALGLA
MQDATLSKAALNELLKHCKQKDNDYQRCLLTSAIYALQGRTVAVQRQASKAVHSNPADPA
LWSLLSRVVAQYTQRNAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAVGSSSADGEKNT
ALKAIQKAALLSPGDPAVWAGLMAACHADDKLALVKNTQPKRMDLHLALLSAVSASNKEF
FENYNQSLEKWSLSQAVTGLIDTRRIAEAEALCTKNLKSNPDQPAVILLLRQVQCKPLLE
SQKPLPDAVLEELQKTVMSNSTSVPAWQWLAHIYQSQGMMGAAEMCYRKSLQVASQQGSW
SGKLSSLLRLALLALEVCMANISSDHWPSLVQEATTEALKLCFCPLAVLLQALLQFKRKM
GARETRRLLERVVYQPGYPKSIVSTARWYLLRHLHAKNDYELIDVLVNNAKTHGDTRALE
LNQKLSSQ
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtgaagactgctctaaaaagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagccgagctagaacaacctgatcaggcccag
ggtgcctataagaaagctgctgagctagagccagaccaattactagcttggcaggggtta
gcaagcttgtatgagaaatgtaatcacataaatgctaaggatgacttacctggtgtttac
caaaagctcctggatctttatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctgtattaccaagaaaagaaacacgtagaggtggcccgaacatggcac
aaattgataaagacacggcaggaaggaggtgcagaaaaccaagaacttcatcagctatgg
aagaaattgacccagttgctggctgagagtactgaggatcagaataatgagacccaacaa
ttgctcttaactgcttttgagaatgcactggacttatcagataagattcctagtgaagat
caccaggtgctttatagacatttcattcaatgtttatccaaatttcctcatgagactgct
aggttgaagaaggcttgtgaaggaatgataaacatctatcctactgtacagtatccatta
gaagtgctttgtttgcatttaattgaaacaggaagccttactgatgagggagaacagtat
tgttgtagattagtggaaatggattcaaaaagtggtctaggtctcattggtttaggcatt
aaagcattacaagacaaaaagtacgaagatgctgttaggagcttaacagaagggttaaag
gaaagccctctctgcacagctggatggtatcatctggcagaagcccaagtcagaatgcat
aaacctaaggaagctgttctttcatgcaatcaagctctgaagaacatagataatcttggt
gtgtctggtggcaatcttcatcagaagaatctttgtcttcatttgaaagcagaggctttg
attaaactctcagattatgaatcttcagaggaagcgattcgtactcttgatcaggtttct
gatgcaaataatatcccaggacttttggttctcaaaggcttggcctatctgaacaaaggc
tcattagatgaagcttcaaagattatggaagaccttctctcttcttaccctgacctagct
gaagctcatgccctggaggctttgattcattttaccaaaaaggactatctacaagcagaa
aaatgttttcagctagctcttgagaaagatgctgaagttgctgaatatcattaccaactt
gggttaacatattggtctatgggtgaagaaacaagaaaagataaaacaaaggctcttacc
cattttctaaaggctgccaaactggatacatacatgggcaaagttttctgctatttaggt
cattattacagggatgtagtaggagatagaaacagagcccgtggatgttacaggaaagct
tttgaattagatgacactgatgctgaatctggagctgcagcagttgacttaagtgtagag
cttgaagagatggaaactgccttagctatcctaacaacagtcactcaaaaggcaagtgct
ggagcggcaaaatgggcctggcttaggcgaggactatactatttaaaagctggtcaacat
tctcaagcagtggctgatttacaggcagcattgagggcagacccaaaggacttcaattgt
tgggagtcattaggagaggcatatttaagcagaggtggctatacaacagctttgaaatcc
ttcacaaaagccagtgagctgaaccccgaatccacatacagtgtgtttaaggttgcagca
atacagcaaatcctaggcaaatataaagaggcggtagctcaataccagctgatcattaaa
aagaaagaagattatgtgcctgctttgaaaggtttgggtgaatgccatctcatgatggca
aaagcagctctagttgattatcttgatggaaaagctgtagactacatagagaaagcactg
gaatattttactcgggctctgcagcatcgagctgatgtgtcttgcctttggaagctagtt
ggggatgcttgtaccagtctgtatgctgtctcactatctaaagtgaatgttagtgtctta
ggagtcctcctaggtcagaaagaaggaaaacaagtattaaagaaaaatgagctcctccat
ctgggcggaaggtgttatggtcgtgcattaaaactgatgtctacatctaacacgtggtgt
gatcttggaattaattattatcgccaagcacaacatctagcagaaacaggcagcaagtcg
aatgatctgccggagctattggagaaatctttgcattgtctgaaaaaggctgtgagactt
gacagtaataatcacttatactggaatgctcttggtgtagtttcatgttacagtggtatt
agaaattatgcccttgctcagcactgtttcatcaaatcaatccaatcagaacaaattaat
gctgttgcatggacaaacttgggagtgttgtaccttgcaaatgaaaagattgagcaagct
catgaagctttcaaaatggctcaatcccttgatccatcttatttaatgtgctggattgga
caagctctaattgcagagacagttggaagttatgacaccatggatctcttcaggcacact
acagaactcagtatgcacacggagggagcaataggttatgcgtattgggtctgtacaaca
ttgcaagataaaagcaacagagacacggagctgtaccagtacaacatcctccagatgaat
gcaattccagcagcacaagtggttttgagtaaatacacagatatttttggatttccagaa
agaattcagaattatgctccagctttcacaatgttgggttacttaaatgaacatctacaa
ctgaagaaggaagcagcagatgcataccaaagggcaattttgttgttacagactgcagaa
gacacagatgcttataatgttacaataagaaattatggcagattgttatgttctattggt
gaatatgataaagctatccaggcttttaagtcaacaccccttgaggagttagaagacatc
ataggttttggattggctttatttatgaagggtctgtataaagagagcagcaaagcctac
gagagagccttgtctactgttgaatcagagcaagacaaagctcatatcctgacagctctg
gcaatagcggagtataaacaaggaaaaatggacgtagccaagacattgttatttaaatgc
tctatcttaaaagaaccaaccaaggaaagccttcaagccctgtgtgctctaggattggca
atgcaggatgcaacactgtccaaagctgcacttaatgagttactgaagcactgcaaacag
aaagacaatgattatcagaggtgccttcttacttcagcgatctatgccctgcaaggtcgc
actgtggcagtgcagagacaagcatctaaagctgttcacagtaacccagctgatcctgct
ctttggtctttgttgtcccgagtagttgctcagtatactcaacgaaatgcaaagggaggt
gcggtagcaggaaatgtggctcatattctggactcaaatcatggaaagaaggcactacta
tacactgcagtaaatcagttggctgtgggaagcagttcagcagatggtgagaaaaatact
gcactaaaagccattcagaaggcagctctcctttctccaggtgatcctgctgtctgggct
gggctaatggcagcttgtcatgctgacgataaactggccctagtgaagaacactcagcca
aagaggatggatttacacttggcactgttatctgctgtttctgcttcaaacaaagaattc
tttgaaaattacaaccaatctcttgaaaagtggtctctctcccaagctgtcactggtcta
atagacacaagaagaatagctgaagctgaagccctctgcacaaagaatttaaaaagtaac
cctgatcagccagctgttatcttacttttgagacaagttcaatgtaaaccactcttagag
tcacaaaaacctctcccagatgctgtacttgaagagctgcaaaaaacagtcatgtccaac
tcaacctctgttccagcttggcagtggctggcacacatatatcagtcccaaggaatgatg
ggtgctgcagagatgtgttatagaaagagtctacaagtagcatcccaacagggcagctgg
agtgggaaactctcaagcctgttgagactagcactgcttgcattagaagtctgcatggct
aatatttccagtgatcactggccatccttggttcaagaagctacaactgaggccttgaaa
ctttgcttttgtccgcttgctgtccttttacaagctttgttacaattcaaacgcaaaatg
ggagcaagagagacacggcgacttttagagagagtggtgtatcagcctgggtatcccaaa
tctattgtttcaacagcacgttggtaccttctgagacacttacatgccaaaaatgactac
gagctcattgatgtgctggtaaacaatgccaaaactcatggagatacaagagcactggaa
ctgaatcagaaattgtcctcacaataa
DBGET
integrated database retrieval system
