KEGG   Phocoena sinus (vaquita): 116750788
Entry
116750788         CDS       T07759                                 
Symbol
CCNH
Name
(RefSeq) cyclin-H isoform X1
  KO
K06634  cyclin H
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03022  Basal transcription factors
psiu03420  Nucleotide excision repair
psiu04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    116750788 (CCNH)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116750788 (CCNH)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    116750788 (CCNH)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psiu03021]
    116750788 (CCNH)
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116750788 (CCNH)
Transcription machinery [BR:psiu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     116750788 (CCNH)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     116750788 (CCNH)
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N CycT2-like_C
Other DBs
NCBI-GeneID: 116750788
NCBI-ProteinID: XP_032481819
Ensembl: ENSPSNG00000002571
LinkDB
Position
3:103378931..103405552
AA seq 330 aa
MYHNSSQKRHWTFASEEQLARLRADANRKFKCKAVANGKVLPNDPVFLEPPEEMTLCKYY
EKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNV
SSPQFVGNLRESPLGREKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPM
LENPEILRKTADDFLNRVALTDAHLLYTPSQIALTAILSSASRAGITMESYLSESLMLKE
NRTCLSQLLDIMKSMRNLVKKYEPPRPEEVAVLKQKLERCHSAELALNVITKKRKGYEDD
DYVSKKSKHEEVCSPKVNFKLSLLYILVQP
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtaccacaacagtagccagaagcggcactggacttttgctagtgaggagcagctggcg
cgattgcgggccgacgccaaccgcaaattcaaatgcaaagctgtggcgaacgggaaggtt
cttccaaatgacccagtctttcttgagcctcctgaagaaatgacgctctgcaagtattat
gagaaaagattattggaattctgttcggtgtttaagccagcaatgccaaggtctgttgtg
ggtacagcttgtatgtatttcaagcgcttttatcttaataactcagtaatggaatatcac
ccccggataataatgctcacttgtgcatttttggcttgcaaagtggatgaattcaatgtg
tctagtccacagtttgttggaaatctgcgggagagtcctcttggacgagagaaggcactc
gaacagattttggaatatgaactactacttatacagcaacttaatttccaccttattgtc
cacaatccttatagaccctttgagggctttctcattgatttaaagactcgctatcccatg
ttggagaatccagagattttgaggaaaacagctgatgactttcttaatagagttgcactg
acggatgctcaccttttatacacaccttcccagattgctctgactgccattttatctagt
gcatccagagcaggaattactatggaaagttatttatcagaaagtctgatgctaaaagag
aacagaacttgcttgtcacagttactagatataatgaaaagcatgaggaacttggtaaaa
aaatatgaaccacccagacctgaagaagttgctgttctgaaacagaagttggagagatgt
cactctgctgagcttgcacttaacgtaattacgaaaaagaggaaaggttatgaagatgat
gattatgtctcaaagaaatccaaacatgaggaggtatgttctccaaaggtaaattttaag
ttatcattgctgtatattctggtacaaccataa

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