Phocoena sinus (vaquita): 116750819
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Entry
116750819 CDS
T07759
Symbol
SREK1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116750819 (SREK1)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
116750819 (SREK1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
116750819
NCBI-ProteinID:
XP_032481939
Ensembl:
ENSPSNG00000009349
UniProt:
A0A8C9BX40
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Position
3:complement(120659905..120715670)
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AA seq
629 aa
AA seq
DB search
MNSAGFGLGLGFGLTPTAVIQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFS
SKVCYVKFRDPSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTSLM
PGAGLLPIPTPNPLTTLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIR
RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF
NGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKNN
ERKGGRSRSHTRSKSRSSSKSRSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKS
RERRKSRSRSRSRDKRKDNREKIKEKERVKEKDREKEREKERDREKEREKEKERGKNKDK
DRDKEREKDRDKDKEKDREREREKEHEKERDKEKEKEQDKEKEREKDRSKEIDEKRKKDK
KSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKR
EKERDHISERRERERSASTRKSCNDRDGKEKVEKNNTSLKEKEHNKEPDSSVGKEVDDKD
AQRTEENKVQQNGNCQPNEENLSTKTEAV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcgccggcttcgggttgggcttaggcttcggcctcacccctacggcggtgatt
caggtgacgaatctgtcgtcggcggtgaccagcgagcagatgcggacgcttttttccttc
ctaggagaaatcgaggagctgcggctctaccccccggacaacgcacctcttgctttttct
tccaaagtatgttatgttaagtttcgtgatccatcaagtgttggcgtggcccagcatcta
actaacacggtttttattgacagagctctgatagttgttccttgtgcagaaggtaaaatc
ccagaggaagccaaagctctctctctattggctcctgctccaaccatgacaagtctgatg
cctggtgcaggcttgcttcccataccgactccaaatcccttaactacactgggtgtttcc
cttagcagtttgggagctataccagcagcagcactagaccccaatattgcaacacttgga
gagataccacagccaccacttatgggaaatgtggatccttccaaaattgatgaaattagg
agaacagtctatgttggcaatttgaattcccagacaacaacagctgatcagctacttgaa
ttttttaaacaagttggagaagtgaagtttgtgcggatggcaggtgatgagactcagccg
actcggtttgcttttgtggaatttgcagaccaaaattctgtaccaagggcccttgctttt
aatggagttatgtttggagacaggccactgaaaataaatcactccaacaatgcaatagta
aaaccccctgagatgacacctcaggctgcagctaaggagttagaagaagtaatgaagcga
gtgcgagaggctcagtcctttatctcagcagctatcgaaccagagtctggaaagaacaat
gaaagaaaaggcggtcgatctcgttcccacactcgttcaaaatccaggtctagctcaaaa
tcccgttctagaaggaaaagatcacagtcaaaacacaggagtagatcccataatagatca
cgttcaagacaaaaagatagacgtagatctaagagccctcataaaaaacgctctaaatca
agggagaggcggaagtcaaggagtcgttcgcgttcacgggacaaaaggaaagacaaccga
gaaaaaatcaaggaaaaggaaagagtgaaagaaaaagatagagaaaaggaaagggaaaaa
gagagagacagggaaaaggaacgtgaaaaagaaaaggaacggggtaaaaacaaagataaa
gaccgggataaagaacgggaaaaggaccgagataaagacaaggagaaggacagagagaga
gagcgggaaaaagagcatgaaaaggaacgagacaaagagaaggagaaggaacaggacaaa
gaaaaggaacgagaaaaggacagatccaaagagatagatgagaaaagaaagaaggataaa
aagtccagaacaccacccagaagttacaatgcatcaagaagatctcgtagttccagcagg
gaaaggcgtaggaggaggagcaggagttcttccagatcaccaaggacatcaaaaaccata
aaacggaaatcttctagatctccatcccctaggagcagaaataagaaggataaaaagaga
gaaaaagaaagggaccacatcagtgaaagaagagagagagaacgttcagcctctacaaga
aagagttgtaatgacagagatgggaaggaaaaggtggagaagaacaatacttcacttaaa
gagaaggagcacaataaagaaccagattcaagtgtgggaaaagaagtagatgacaaggat
gcacaaaggactgaggaaaacaaagtacagcaaaatgggaattgtcaaccaaatgaagaa
aacctctctaccaaaacagaagcagtatag
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