Phocoena sinus (vaquita): 116750828
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Entry
116750828 CDS
T07759
Symbol
WDR41
Name
(RefSeq) WD repeat-containing protein 41 isoform X1
KO
K23610
WD repeat-containing protein 41
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04140
Autophagy - animal
psiu05014
Amyotrophic lateral sclerosis
psiu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116750828 (WDR41)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116750828 (WDR41)
05022 Pathways of neurodegeneration - multiple diseases
116750828 (WDR41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116750828 (WDR41)
Membrane trafficking [BR:
psiu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
116750828 (WDR41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR11_1st
PorZ_N_b_propeller
DUF5793
Motif
Other DBs
NCBI-GeneID:
116750828
NCBI-ProteinID:
XP_032481969
Ensembl:
ENSPSNG00000004776
UniProt:
A0A8C9BAE6
LinkDB
All DBs
Position
3:112042659..112088316
Genome browser
AA seq
459 aa
AA seq
DB search
MLRWLIGGGREPQGLAEQSPLQTIGEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASA
GDDGIVVVWNAQTGEKLLELNGHTQKITAIITFPSLEACEEKNQLILTASADRTVIVWDC
DTGRQVQKVSCFQSTVKCLALLQRLDVWLSGGNDLCVWNRKLDLLCKTSHLSDTGISALI
EIPKNCVVAAVGKELIIFRLVAPTEGSLGWDILQVKRLLDHQDNILSLVNVNDLSFVTGS
HVGELIIWDILDWTVQACERNFWDPSPQLDTQQEIKLCQKPNDVSIHHFTWDEENVFVAV
GRGLYVYNLQMKRVIACQKTAHDSNVLHVAKLPNRQLISCSEDGSVRIWELREKQQLAAE
PVPTGFFNMWGFGRVNKQASHPVKKQQENATSCSLELIGDLIGHSSSVEMFLYFEDHGLV
TCSADHLIILWKNGERESGLRSLKLFQKLEENGDLYLAV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgatggctgatcgggggaggccgagaacctcagggactggccgagcaatctcct
ttacagacaataggtgaagaacaaacccagaacccctacactgaactgcttgtactgaaa
gctcatcatgatattgtacggtttctggtacagttagatgattacagatttgcatctgct
ggtgatgatggaattgtagttgtgtggaatgcccagacaggagaaaaacttttggaactc
aatggacacactcaaaagataacagctattattacatttccttctttggaagcttgtgaa
gaaaaaaatcaactgatcttgacagcctctgctgacagaacagttattgtatgggactgt
gatactggcagacaagttcagaaagtgtcatgcttccagtctactgtaaagtgtttagct
cttcttcagagactagatgtttggctttctggtgggaatgacctctgtgtgtggaaccga
aaattagatctcctgtgtaagactagtcacctttctgatacagggatcagtgctttgatt
gaaatacctaagaactgtgttgtggcagcagttggcaaagaactgataattttcaggctg
gtagcacccacagagggatcactaggatgggatattcttcaagttaagcgcctccttgat
caccaggataatattctctcactggttaatgtcaatgatttgagttttgtaactggctcc
catgttggagagctcatcatctgggatatcctggactggactgtgcaggcctgtgaacgc
aacttctgggacccatctccacagctggacactcagcaagaaataaaactctgtcaaaag
ccaaatgacgtttctattcatcatttcacatgggatgaagagaatgtatttgttgcagtt
ggaaggggtttatacgtgtataaccttcaaatgaagcgtgtgattgcctgccagaaaact
gcacatgactccaatgtcctgcacgttgccaaacttccaaacaggcagttaatctcatgc
tcagaagatggaagtgtacgcatttgggagttacgagaaaaacagcagcttgcagctgaa
cctgtaccaacaggtttttttaatatgtggggatttggaagagtaaataaacaagccagc
caccctgttaaaaaacaacaagaaaatgccacttcatgttcactagagcttattggagat
ttaattggacactcatcatctgtggagatgtttctgtactttgaagatcatggactagtg
acatgttctgctgatcatctcattattttgtggaaaaatggagaacgagaatctggattg
cgcagcttaaagttatttcaaaaattagaggagaatggtgacttatatcttgctgtctag
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