Phocoena sinus (vaquita): 116750829
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Entry
116750829 CDS
T07759
Symbol
AP3B1
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116750829 (AP3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116750829 (AP3B1)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Others
AP-3 complex
116750829 (AP3B1)
Endosome - Golgi transport
116750829 (AP3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
SEEEED
Cnd1
AP3B1_C_2
HEAT_2
INTS1_R4
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
116750829
NCBI-ProteinID:
XP_032481971
Ensembl:
ENSPSNG00000004553
UniProt:
A0A8C9BNB4
LinkDB
All DBs
Position
3:111285534..111562159
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AA seq
1145 aa
AA seq
DB search
MSSNSFAYSEQSGGGEATELGQEATSTISPSGAFGLFSSDMKKNEDLKQMLESNKDSAKL
DAMKRIVGMIAKGKNASDLFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTF
QRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSL
DPEQKEMLIEIIEKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDVEEWG
QVVIIHMLTRYARTQFVSPWKEGDGLEDNEKDFYDSDEEQKEKTDKGKKPYTMDPDHRLL
IRNTKPLLQSRNAAVVMAVAQLYWHIAPKSEAGIISKSLVRLLRSNREVQYIVLQNIATM
SIQRKGMFEPYLKSFYVRSTDPTMIKILKLEILTNLANEANISTLLREFQTYVKSQDKQF
AAATIQTIGRCATNISEVTDTCLTGLVCLLSNRDEIVVAESVVVIKKLLQMQPVQHGEII
KHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKTAKSFTGEDDLVKLQILNLG
AKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPNEKSGALSKYAKKIFLA
QKPAPLLESPFKGRDHYQLGTLSHTLNTKATGYLELSNWPEVAPDPSVRNVEVIELAKEW
TPAGKAKKENPDKKFYSESAEEEEDSSESSSDSESESGSESGEQDDEGDSSEDSSEHESE
SGSGSEAENKRAAKKNSKTKGKSDSEDVDKENENSKTSDSSNAESSSIEDSSSDSASESE
SESESESRKVTKEKENKTKQDRNPLTKDVSLLDLDDFNPVSTPVARPTPALSPSLIADLE
GLNLSASSSVISVSTPVFVPVKTHVLLHRMSGKGLAAHYFFPRQPCVFGDNMVSVQITLN
NTTDWKVENIHIGEKKLPVGMQMHVFNPIESLEPEGSITVSMGIDFCDSTQTASFQLCTK
DDCFSVNIQPPVGELLLPVAMSEKDFKKEQGMLTGMNETSTVIIAAPQNFTSSVILQKVV
NVANVGVVPSGQDNIHSTRASHCCGLSRCRAQAPDVQVQRPWLTGPAALRHVGSSRTGAQ
TRVPCIGRRTLNHCATREAFLVLFSALNTSFHLLSDFLRQKLFCFIYGSFELLKLLKHQN
IVHQL
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaacagcttcgcttacagtgagcagtccggaggaggggaggcgacggagctg
ggtcaggaggcgacctcaaccatttccccctccggcgccttcggcctctttagcagcgat
atgaagaagaatgaagatctaaagcaaatgttagagagcaacaaagattctgctaaattg
gatgctatgaaacggattgttgggatgattgcaaaagggaaaaatgcatctgatctgttt
cctgctgttgtgaagaatgtggccagtaaaaatattgagatcaagaagttagtatatgtt
tacctggtccgatatgctgaagaacagcaggatctggcactcttgtccataagcactttt
cagcgagctctgaaggacccaaatcaactaattcgtgcaagtgctttgagagttctatca
agtattagagtgccaattattgtacctattatgatgcttgctattaaggaagcttctgct
gacttatcaccatatgttaggaagaatgcagcccatgcgatacaaaaattgtacagcctt
gatccagagcagaaggaaatgttaattgaaataattgaaaaacttctgaaggataaaagc
acattggtggctggcagtgttgtcatggcttttgaagaagtatgcccggatagaatagat
ctcattcacaagaattaccgcaagctatgtaatttactagttgatgtagaagagtggggg
caggttgtcataatccacatgctaactcgatatgctcgtacacagtttgtcagtccttgg
aaagagggtgatggtctagaggacaatgaaaaggatttctatgattctgatgaggaacag
aaggaaaagactgacaaagggaagaagccatatactatggatccagaccatagactttta
attcggaatacaaagcctttgcttcagagcaggaatgcagcggtggttatggcagttgct
cagctgtattggcacatagcaccaaaatcggaagctggcattatttctaaatcactagtg
cgtttacttcgtagcaatagggaggtgcagtatattgtcctacagaatatagcaactatg
tcaattcaaagaaagggtatgtttgaaccttatctgaagagtttttatgttaggtcaacc
gatccaactatgatcaagatactgaagcttgaaattttgacaaacttggcaaatgaagcc
aacatatcaactcttcttcgagaatttcagacctatgtgaaaagccaggataaacagttt
gcagcagccactattcaaactataggcagatgtgccaccaacatctcagaagtcactgac
acgtgccttactggcctggtgtgtctgctgtccaacagggatgaaatagttgttgctgaa
agtgtggttgttattaagaaattactgcaaatgcaacccgtacaacatggtgaaattatt
aaacatatggccaaactcttggacagtatcactgttcctgtggctagagcaagtattctt
tggctaattggagaaaactgtgaacgagttcctaaaattgcccctgatgttttgaggaag
acggctaaaagcttcactggtgaagatgatctggtaaaactgcagattctaaatcttgga
gcaaaactgtatttaaccaactccaaacagacaaaattgcttacccagtacatattaaat
ctcggcaagtatgatcaaaactacgacatcagagaccgtacaagatttattaggcagctt
attgttccgaatgagaagagtggagctttaagtaaatatgccaaaaaaatattcctggct
caaaaaccggcaccactgcttgagtctccttttaaaggtagggatcattaccagcttggc
actttgtctcatactctcaacactaaagctactgggtacctggaattatctaattggcca
gaggtggcgcctgacccatcagttcgaaatgtagaagtaatagagttggcaaaagaatgg
accccagcaggaaaagcaaagaaagagaatcctgataagaaattttattctgaatctgcg
gaggaggaggaggactcttctgagagcagcagtgacagtgagagtgaatctggaagtgaa
agtggggaacaagatgacgaaggagacagcagtgaggactccagtgagcacgagagtgag
agtggaagtgggtcagaggcagaaaataaaagagcagccaagaagaactccaaaaccaaa
ggaaaaagtgattctgaagatgtggataaggaaaatgaaaactctaaaacttcagattct
tccaatgccgaatctagttcaatagaagacagttcttcagattctgcatcagaatcagaa
tctgaaagtgaatctgaatccagaaaagttactaaggagaaagaaaacaaaacaaagcaa
gatagaaatcctcttaccaaagatgtttcacttctagatctagatgattttaacccagtg
tccactccagttgcacgtcccaccccagctctttctccaagcttgatagctgatcttgaa
ggtttaaacttgtcagcttcttcatcagtcatcagtgtcagtactcctgtctttgtacca
gtgaaaactcatgtgctgcttcatcggatgagtggaaaaggactagctgcccattatttc
tttccaagacagccttgcgtttttggtgataatatggtctctgtgcaaataacattgaat
aataccactgattggaaggtagaaaatatccacataggggaaaagaaacttcctgtgggc
atgcaaatgcatgtttttaatccaatagaatctcttgagcctgagggatccattactgtt
tcaatgggtattgacttttgtgattccactcagactgccagtttccagttgtgtaccaag
gatgattgcttcagtgttaatattcagcctcctgttggagaactgcttttacctgtggcc
atgtcagagaaagattttaagaaagagcaaggaatgctaacgggaatgaatgaaacttct
actgtaattattgctgcaccgcagaatttcacttcctctgtgatccttcagaaggttgta
aacgtagccaacgtaggtgtagtcccttctggccaagataatatacacagtacgcgggcc
tctcactgttgtggcctctcccgttgcagagcacaggctccggacgtgcaggttcagcgg
ccatggctcacgggcccagccgctctgcggcatgtgggatcttcccggaccggggcacaa
acccgtgtcccctgcatcggcaggcggactctcaaccactgcgccaccagggaagccttc
cttgttttgttttctgctttaaatacttcttttcacttactgagtgattttcttcggcag
aagttgttctgttttatttatggatcctttgaattattgaaattactaaaacatcaaaat
attgtacatcaactttaa
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