Phocoena sinus (vaquita): 116750838
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Entry
116750838 CDS
T07759
Symbol
NOTCH3
Name
(RefSeq) neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu01522
Endocrine resistance
psiu04330
Notch signaling pathway
psiu04371
Apelin signaling pathway
psiu04658
Th1 and Th2 cell differentiation
psiu04919
Thyroid hormone signaling pathway
psiu05165
Human papillomavirus infection
psiu05200
Pathways in cancer
psiu05206
MicroRNAs in cancer
psiu05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116750838 (NOTCH3)
04371 Apelin signaling pathway
116750838 (NOTCH3)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
116750838 (NOTCH3)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
116750838 (NOTCH3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116750838 (NOTCH3)
05206 MicroRNAs in cancer
116750838 (NOTCH3)
09162 Cancer: specific types
05224 Breast cancer
116750838 (NOTCH3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116750838 (NOTCH3)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
116750838 (NOTCH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
Notch
EGF_2
NODP
Ank_4
NOD
Ank_3
Ank_5
EGF_3
EGF_Teneurin
cEGF
JAG1-like_EGF2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
116750838
NCBI-ProteinID:
XP_032482002
Ensembl:
ENSPSNG00000002628
UniProt:
A0A8C9B595
LinkDB
All DBs
Position
3:13909967..13943644
Genome browser
AA seq
2320 aa
AA seq
DB search
MGPGPRGRRRRRLMSPPPPLPSVRTLPLLLLLAGPGAAAPPCLDGSPCANGGRCTQLPSR
EAACLCPPGWVGERCQLEDPCHSGPCAGHGVCQSSVVAGTARFSCRCPRGFRGPDCSLPD
PCLSSPCAHGARCSVGSDGRYVCSCPPGYQGRSCRSDVDECRMGGPCRHGGTCLNTPGSF
RCQCPAGYTGPLCESPLVACAPSPCRNGGTCRQSGDLTYDCACLPGFEGQNCEVNVDDCP
GHRCLNGGTCVDGVNTYNCQCPPEWTGQFCTEDVDECQLQPNACHNGGTCFNTLGGHSCV
CVNGWTGESCSQNIDDCATAVCFHGATCHDRVASFYCACPMGKTGLLCHLDDACVSNPCH
EDAICDTNPVNGRAICTCPPGFTGGACDQDVDECSIGANPCEHLGRCVNTQGSFLCQCGR
GYTGPRCETDVNECLSGPCRNQATCLDRIGQFTCICMAGFTGTYCEVDMDECQSSPCVNG
GVCKDRVNGFSCTCPSGFSGAMCQLDVDECASTPCRNGAKCVDQPDGYECRCAEGFEGTV
CEHNVDDCSPDPCHHGRCVDGIASFSCACAPGYTGTRCESQVDECRSQPCRHGGKCLDLV
DKYLCRCPPGTTGVNCEVNIDDCASNPCTFGICRDSINRYDCVCQPGFTGPLCNVEINEC
ASSPCGEGGSCVDGENGFQCLCPPGSLPPLCLPPSHPCAQEPCSHGVCHDAPGGFRCVCE
LGWSGPQCSQSLARDACESHPCWAGGTCTSDGTGFRCTCPPGVQGRQCELLSPCTPNPCE
HGGYCESAPGQPAVCSCPPGWQGSRCQQDVDECAGPSPCGPHGTCANLAGSFSCTCHEGY
SGSSCDQDIDDCDPNPCLNGGSCQDGVGSFSCSCLPGFAGPRCARDVDECLSSPCGPGTC
TDHVASFTCTCPPGYGGFLCEQDLPDCSPSSCFNGGTCVDGVNSFSCLCRLGYTGTHCQH
EADPCLSRPCLHGGICAAAHPGFRCTCPEGFTGAQCQTLVDWCSRTPCQNGGHCARTGAS
FYCLCPSGWSGRLCDIQSLPCREAAAQIGVPLEQLCQAGGQCVDKDSSHYCVCPEGHTGS
HCEREVDPCLAQPCQHGGTCRGYMGGYVCECPAGYTSDNCEDDMDECASQPCQHGGVCID
LVARYLCSCPPGTLGVLCEINEDDCGPGPPLDPGPRCLHNGTCVDLVGGFRCTCPPGYTG
LRCEADINECRPGACHAAHTRDCLQDPGGGFHCLCHAGFTGPHCQTVLSPCESQPCQHGG
QCHPSPGAGGALTFSCHCVPPFSGPRCERVARSCWELQCPVGVPCQQTVRGPRCACPPGL
SGPACRGSRGSPLGAANASCVTSPCLHGGSCRPETLAPFFRCACASGWAGPRCEIPAAVP
EAPEEPSCPRAACEAKSGDKRCDRECNSPGCGWDGGDCSLSVSDPWRQCAALQCWLLFNN
SRCDPACSSPACLYDNFDCRAGGRERTCNPVYEKYCADHFADGRCDQGCNTEECGWDGLD
CAGEVPALLARGVLVLTVLLPPEELLRSSADFLQRLSGILRTSLRFRLDENGQAMVFPYH
RPGPGSESRNRRELAPEVIGSVVMLEIDNRLCLQSPENDHCFPDAQSAADYLGALSAVER
LDFPYPLRAARGEPLELPEPSVPLLPLLAASAVFLLVILVLGVMVARRKREHSTLWFPEG
FALHKDAAAGHKGRREPVGQDALGMKNMAKGESLMGEVATDWMDTECPEAKRLKVEEPGV
GAEDAVDCRQWTQHHLVAADIRVAPAMALTPPQGDADADGMDVNVRGPDGFTPLMLASFC
GGALEAIPAEEDEAEDTSASIISDLICQGAQLGARTDRTGETALHLAARYARADAAKRLL
DAGADTNAQDHSGRTPLHTAVTADAQGVFQILIRNRSTDLDARMADGSTALILAARLAVE
GMVEELIASHADVNAVDELGKSALHWAAAVNNVEATLALLKNGANKDMQDSKEETPLFLA
AREGSFEAAKLLLDHFANREITDHLDRLPRDVAQERLHQDIVRLLDQPSGPRSPPGPHGL
GPLLCPPGAFLPGLKVAQSGGKKSRRPPGKAGLGPQGTRGRGKKLTLACPGPLAESSVTL
SPVDSLDSPRPFGGPPASPGGFPLEGPYAAATATAVSLAQLGGAGRAGLGRQPPGGCVLS
LGLLNPVAVPLDWARLPPPAPPGPSFLLPLAPGPQLLNPGKPVSPQERPPPYLAAPGHGD
EFPAAGAHSSPPKARFLRVPSEHPYLTPSPESPEHWASPSPPSLSDWSDSTPSPATATGA
TAAGTLSAQPLPLSVPGPLAQSQTQLGSQPEVTPKRQVLA
NT seq
6963 nt
NT seq
+upstream
nt +downstream
nt
atggggccggggccccggggccgccgccgccgtcgcctgatgtcgccgccgccacccctg
ccgtccgtgcggacgctgcccttattgctactgctagcggggccgggggctgcagcgccc
ccttgcctggatggaagcccgtgtgcgaatggaggtcgctgcacccagctgccctctcgg
gaggctgcctgcctgtgcccaccaggctgggtgggtgaacggtgtcagctggaagacccc
tgccattccggcccctgtgctggccatggtgtctgccagagctcggtggtggcaggcacc
gcccggttctcctgccgctgcccccgtggcttccgaggcccagactgctccctgccagac
ccctgcctcagcagcccctgtgcccatggtgcccgctgctcggtggggtccgatggccgc
tacgtctgctcctgcccacccggctaccagggccgcagctgccgaagcgacgtggatgag
tgccggatgggcggaccctgccgccatggtggcacctgtctcaacacacctggctccttc
cgctgccagtgcccagctggctacacagggccactgtgtgagagccccttggtggcctgt
gccccctcgccgtgccgtaacgggggcacctgtagacagagtggcgacctcacctacgac
tgtgcctgccttcctgggttcgagggccagaactgtgaagtgaatgtggacgactgtcca
gggcaccgatgtctaaatggggggacgtgtgtggacggtgtcaacacctacaactgccag
tgccctcctgagtggacaggccaattctgtacggaggacgtggacgagtgtcagctccag
cccaacgcttgccacaatgggggcacttgcttcaacacgctgggtggccacagctgtgtg
tgtgtcaatggctggacaggcgagagctgcagtcagaatattgatgactgtgccacggcc
gtgtgcttccatggggccacctgccatgaccgtgtggcctccttctactgtgcctgcccc
atgggcaaaactggacttctgtgtcatctggatgacgcctgcgtcagcaacccctgtcac
gaggatgctatctgcgacacgaacccggtgaacggcagggccatctgcacctgtccacct
ggcttcacaggcggggcttgtgaccaggacgtggatgagtgttccatcggtgccaaccct
tgtgagcacctgggccggtgcgtgaacacacagggctcattcctgtgccagtgcggccgt
ggctacactggtccgcgttgcgagaccgatgtcaatgagtgcctctccggcccctgccgc
aaccaggccacgtgcctcgaccgtataggccagtttacctgcatctgcatggcaggcttc
acaggcacttattgtgaggtggacatggacgagtgtcagagcagcccgtgtgtcaacggc
ggagtctgcaaggacagagtcaatggcttcagctgcacctgcccctcgggcttcagcggg
gctatgtgtcagctggacgtggatgaatgcgccagcacaccctgccggaatggagccaag
tgcgtggaccagccggatggctatgagtgccgctgcgcagagggcttcgagggcacggtg
tgtgagcacaacgtggatgactgctcgccagacccatgccaccatgggcgctgtgtggat
ggcatcgccagtttctcgtgcgcctgtgccccgggctacaccggcacgcgctgtgaaagc
caggtggacgagtgccgaagccaaccctgccgccatggtggcaaatgcctagacctggtg
gacaaatacctctgccgctgccctcccggcaccacaggtgtgaactgtgaggtgaacatt
gatgattgtgctagcaacccctgcacctttggaatctgccgggacagcatcaaccgctat
gactgtgtctgccagcctggcttcacagggcctctctgcaacgtggagatcaacgagtgt
gcgtccagcccatgcggtgaggggggctcctgcgtggatggtgaaaatggcttccaatgc
ctctgcccacctggctccctgcccccgctctgtcttcccccaagccatccctgcgcccaa
gaaccctgcagtcatggcgtctgccacgacgcgcctggagggttccgctgcgtgtgtgag
cttggctggagtggccctcagtgcagtcagagcctcgctcgagatgcctgtgaatcccat
ccctgctgggcaggcggcacctgcaccagtgatggaacgggcttccgctgtacctgtccc
cctggtgtccagggccgtcagtgtgagctgctgtccccctgcaccccaaatccctgtgaa
catgggggctactgtgagtctgcccctggccagccggctgtctgctcctgcccccctggt
tggcaaggctcacgatgtcagcaggacgtggatgaatgtgctggcccctcaccctgtggt
ccccatggtacctgcgccaacctggcagggagtttcagctgtacctgccacgagggctat
agtggctcttcctgtgatcaggacatcgatgactgtgaccccaacccctgcctgaatggt
ggctcatgtcaggatggagtgggctccttttcctgctcctgcctacctggctttgctggc
ccccgctgcgcccgagatgtggatgagtgtctgagcagcccctgcggcccaggcacctgc
acagaccacgtggcctccttcacctgcacctgcccgccgggttatggaggcttcctctgt
gagcaggacctacctgactgcagccccagctcctgcttcaatggtgggacctgcgtggat
ggtgtgaactcgttcagctgcctgtgccgcctgggctacactggcacacactgccaacac
gaggccgacccttgcctctcgcgaccctgcttgcacgggggcatctgcgctgccgcccac
cccggcttccgctgtacctgccctgaaggcttcaccggcgcgcagtgccagaccctggta
gactggtgcagccgcacaccttgtcagaatgggggccactgtgcccggaccggggcctct
ttctactgcctttgcccttcgggatggagcggccgcctctgtgacatccagagtctaccc
tgcagagaggctgcagcccaaatcggggtgcctctggagcagctgtgtcaggctggtggg
cagtgcgtggacaaggacagctcccactactgcgtgtgcccagagggccacacaggcagt
cactgtgagcgggaggtggacccctgcttggcccagccctgccagcatgggggcacctgc
cgaggctacatgggaggttatgtgtgcgagtgtccagctggctacactagtgacaactgt
gaggatgacatggacgagtgtgcctcccagccctgccagcatgggggcgtctgcattgac
cttgtggcccgctatctctgctcgtgtcctccaggaacgctgggcgtgctctgcgagatt
aatgaggatgactgtggcccaggcccacccctggatccgggcccccggtgcctgcacaat
ggtacctgtgtggacctggtgggtggcttccgctgcacctgccccccgggatacaccggc
ctgcgctgtgaggcggacatcaatgagtgtcgtccaggtgcctgccatgcggcacatacc
cgggactgcttgcaggacccaggtgggggcttccactgcctttgtcatgccggcttcaca
ggtccccactgtcagactgtcttgtctccctgtgagtcgcagccatgccagcatggaggc
cagtgccatcccagccccggtgctgggggagctctgactttctcttgccactgtgtcccg
ccgttctctggcccgcgctgcgagcgggtggcacgttcctgctgggagttgcagtgcccg
gtgggcgtcccgtgccagcagacggtccgtggaccgcgctgcgcctgtcccccggggctg
tcgggtcccgcctgccggggttcccgggggtcgccactgggagccgccaatgccagctgc
gtgacctccccctgcctccacgggggctcctgccgcccggagacgctggcgcccttcttc
cgctgcgcgtgcgcgtcaggctgggctgggccgcgctgtgagatacctgcagcggtgccc
gaggcccccgaggagccgtcttgcccgagagccgcctgcgaggccaaaagcggcgacaag
cgctgtgaccgagagtgcaacagcccaggctgcggctgggatggcggcgactgctcgctg
agcgtgagcgacccctggcggcagtgtgcggcgttgcagtgctggctcctcttcaacaac
agccgctgcgaccccgcctgcagctcgcccgcctgcctctatgacaacttcgactgccgc
gcaggcggccgggagcgcacctgcaacccggtgtatgagaagtactgcgcggaccacttt
gccgacggccgctgcgaccagggctgcaacacagaggagtgcggttgggatggactggac
tgtgcgggtgaggtgccagctctgctggcccgaggtgtcctggtgctcactgtgctgctg
ccgccggaggagctgctgcgctccagtgccgacttcctgcagcggctcagtggcatcctg
cgcacctctctgcgcttccgtctggatgagaacggccaggctatggtcttcccttaccac
cggcctggtcctggctctgaatcccggaatcggcgggagctggcccctgaggtgatcggc
tctgtggtgatgctggagattgacaaccgtctgtgcctgcagtcgcctgagaatgaccac
tgttttcccgacgcccagagtgcggcagactatctgggagcgttgtcagcagtggagcgc
cttgacttcccgtacccactgcgggcggcacggggggaaccgctggagctgccagaacca
agcgtgccgctactgcccctgctggctgcgagcgccgtcttcctgctggtcattctcgtc
ctgggcgtcatggtggcccgccgcaagcgtgagcacagcaccctctggttccccgagggc
ttcgcgctgcacaaggatgctgcagctggccacaagggccggcgggaacccgtgggccaa
gatgctctgggcatgaagaacatggccaagggtgagagtctgatgggggaggtggccaca
gactggatggacacagagtgcccggaggccaagcgactgaaggtagaggagcctggtgtg
ggagctgaggatgctgtggactgccgccagtggactcaacaccacctggttgctgccgac
atccgtgtggcaccagccatggcattgacgccaccacagggcgatgcagatgctgatggc
atggatgtcaacgtgcgtggtccagatggcttcaccccgctaatgctggcctccttctgc
gggggggccctggaagcaatcccagctgaggaggacgaggcagaagacacgtcagccagc
atcatctcagaccttatctgccagggggcacagcttggggctcggaccgaccgcacgggt
gagacggccctgcacctggctgcccgctatgcccgggctgatgcggccaagcggctgctg
gatgctggggcagacaccaatgcccaggaccactcaggccgcacccccctgcacacagcc
gtcactgctgatgcccagggcgttttccagattctcatccggaaccgctccacagacctg
gatgcccgcatggcagacggctccacagcactgatcctggcggcccgcctggcagtggag
ggcatggtggaagagctcattgccagccatgctgatgtcaatgctgtggatgaactcgga
aaatcagccttacactgggctgcagctgtcaacaacgtggaggccaccttggccctgctc
aaaaatggagctaacaaagacatgcaagatagcaaggaggagactccgctgttcctggcc
gccagggagggcagctttgaggctgccaagctgctgctggaccactttgccaaccgtgag
atcacagaccacctggacaggctgccccgggatgtggcccaggagcggctgcaccaggac
atcgtgcgcttgctagaccagcccagtgggccccgtagcccccctggcccccacggcctg
gggcccttgctctgcccgcccggggccttcctcccaggcctcaaggtggcacagtccggg
ggcaagaagagccggaggcctcctgggaaggcggggctggggcctcagggcacccggggg
cggggcaagaagctgaccctggcctgcccgggtcccttggccgagagctcggtcacgctc
tcgccggtggactcgctggactccccacggccctttggtggcccccccgcgtcccctggc
ggcttccccctcgaggggccctacgcggctgctacggccacagccgtgtctctggcacag
cttggtggcgcgggccgggcaggtctcgggcgccagccccccgggggctgtgtgctcagc
ctgggcctgctgaaccccgtggccgtccccctcgactgggcccggctgcccccacctgcc
cccccaggtccctctttcctgctgccgctggccccgggaccccagctgctgaaccccggg
aagcccgtgtccccccaggagcggcccccaccatacctggcagccccaggacatggcgat
gagttccccgcggccggggcccacagcagccccccaaaggcccgcttcctgcgggtcccc
agcgagcacccttacctgaccccatccccagagtcccccgagcactgggccagcccctca
cctccctcactctcggactggtccgactccacgcccagcccggccactgccaccggggcc
acggccgctgggacactgtctgcccagccgctccccctgtcggtccctggccctcttgct
cagtcccagacccagctagggtcccagcctgaagtcacccccaagaggcaagtgttggcc
tga
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integrated database retrieval system
