Phocoena sinus (vaquita): 116750872
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Entry
116750872 CDS
T07759
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116750872 (ZFR)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116750872 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
116750872
NCBI-ProteinID:
XP_032482082
Ensembl:
ENSPSNG00000007159
LinkDB
All DBs
Position
3:147095336..147170718
Genome browser
AA seq
1081 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAAAAAAQYSSVLWSSMDQQPASG
VAYSHPTTVASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTA
HTATDYGYTQRQQEAPPPPPPATTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVA
AAAQPQPSVAETYYQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSS
TVQPVAAAATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAA
AAAAAAATAAWTGTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEG
QKHKKKEAALKASQNTSSSNNSTRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKL
HTKLGKPIPSTEPNVVSQATSSTAVSASKPTASPSSIAASNCTVNTSSIATSSVKGLTTT
GNSSLNSTANTKVSAVPANMAAKKTSTPKINFVGGNKLQSTGNKTEDLKGTECAKSTPVT
AVQIPEVKPDTVSEPVTPASLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFND
PNAKEMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEE
RWRMEMRRYEEDMYWRRMEEEQHHWDDRRRMPDGGYPHGPPGPLGLLGVRPGMPPQPQGP
APLRRPDSSDDRYVMTKHATIYPTEEELQAVQKIVSITERALKLVSDSLSEHEKSKSKEG
DDKKEGGKDRALKGVLRVGVLAKGLLLRGDRNVNLVLLCSEKPSKTLLSRIAENLPKQLA
VISPEKYDIKCAISEAAIILNSCVEPKMQVTITLTSPIIREENMREGDVTSGMVKDPPDV
LDRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEK
AISSASSPQSPGDALRRVFECISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSS
AQFALRLLAFRQIHKVLGMDPLPQMSQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDN
F
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgccctgtagtttctttcacctatgtgcccagccggctgggggaagat
gccaaaatggcgaccggcaactactttggattcacccacagcggggcggcggcggcggcg
gctgcggcccagtatagttctgttctctggagcagcatggaccagcagccagcttcgggt
gtagcctactctcatccaactacggttgctagctacactgtccatcaggctccagtagct
gctcacacagttactgctgcctatgcaccagcagccgccacagttgcagttgccaggcct
gctccagtagctgttgcagctgctgcaacagctgctgcatatggagggtaccccactgca
cacacagcgactgactatggttacacacagaggcaacaagaagcacctccaccaccaccc
ccagctactacacaaaactaccaggactcgtactcatatgtaagatccacagctcctgct
gtagcttatgatagtaagcagtactaccaacaaccaacagcaactgcagctgctgtagct
gctgccgcccagcctcagccttctgttgctgagacctactatcagacagcccctaaagca
ggttatagccaaggtgcaactcagtatacacaagcccagcaaactcgacaagtgacagcc
ataaaaccagccacaccaagtccagctaccactactttctccatttatcctgtatcctcc
accgtacagccagtagcagctgcagctactgtggtgccgtcctatacccagagtgctact
tacagtaccacggcagttacttattctggtacatcttattcaggttacgaagcagccgtc
tattcagctgcgtcctcctactaccaacaacagcagcagcaacagaagcaggcagcggcg
gcggcggcagcagctgctgcaacagctgcttggacagggaccaccttcactaaaaaagca
ccattccaaaataaacaactgaaaccaaaacagcctcccaaaccaccccagattcactat
tgtgatgtttgtaagatcagctgtgctggaccacagacttacaaagaacatttagaaggg
cagaaacataaaaaaaaagaagctgcattgaaagcctcacagaataccagcagcagcaac
aactccactcgtgggactcaaaatcagctacgttgtgagctctgcgatgtgtcttgtaca
ggagcagatgcgtatgctgcccacattcgtggtgctaagcatcagaaagtggttaaatta
cacacaaaacttggcaaacccattccttcaacagaaccaaacgttgttagccaagctact
tcttcaacagccgtgtctgcttcaaagccaactgcctctccttcaagcattgcagcaagc
aattgtactgtgaatacttcatcaattgcaacttcttcagtgaaaggtcttacaactaca
ggaaactcgtctcttaatagcacagccaacactaaagtatcagcagtgcctgcaaatatg
gctgccaagaaaacatctacacccaaaataaactttgttggtggtaataagctgcaatca
acaggaaataaaacagaagacttaaaaggaaccgaatgtgctaaaagcactcctgtcact
gctgtacagatcccggaagtaaagccagacacagtgtcagaaccagtcacacctgcgtcc
cttgctgctttgcagagtgatgtgcagccggtgggccatgattatgtggaggaggtacga
aatgatgaaggaaaagtaattcgattccattgcaaattgtgcgagtgcagctttaatgat
cccaatgctaaggagatgcacttaaaagggcgaagacacagacttcaatataaaaaaaaa
gtaaatccagatctgcaagtagaagtaaaacccagtattcgagcaagaaagattcaagaa
gagaaaatgaggaagcaaatgcagaaagaggagtattggcgaagaagagaagaagaggaa
cgctggagaatggaaatgagacgttatgaagaggacatgtactggagaagaatggaggaa
gaacagcatcattgggatgatcgccgccgaatgcctgacggaggctatcctcatggtccc
ccaggcccactaggcctcctgggagtccgaccaggcatgcctcctcagccacaggggcct
gcacccttacgtcgtcctgactcatctgatgatcgttatgtaatgacaaaacatgcaacc
atttatccaactgaagaggagttacaggcagttcagaaaattgtttctatcactgaacgt
gctttaaaacttgtttcagacagcttgtctgagcatgagaagagcaagagcaaagaggga
gatgataagaaagagggaggtaaagacagagctttaaaaggagttttgagagtgggagta
ttggcaaaaggattacttctccgaggagatagaaatgtcaaccttgttttgctgtgctca
gagaaaccttcaaagacattattaagccgtattgcagaaaacctacccaagcagcttgct
gttataagtcctgagaagtatgacataaaatgtgcaatttctgaagcggcaataattttg
aactcatgtgtggaacccaaaatgcaagtcactatcaccctgacgtctccaattattcga
gaagagaacatgagggaaggagatgtaacctcgggtatggtgaaagacccaccggacgtc
ttggacaggcaaaaatgccttgacgctctggctgctctacgccacgctaagtggttccag
gctagagctaatggtctgcagtcctgtgtgattatcatacgtattcttcgggacctctgt
cagcgagttccaacttggtctgattttccaagctgggctatggagttactagtagagaaa
gcaatcagtagtgcttctagtcctcagagtcctggagatgcactgagaagagtgtttgag
tgcatttcttcagggattattcttaaaggtagtcctggacttctggatccttgtgagaag
gatccctttgataccttggcaacaatgactgaccagcagcgtgaagacatcacatccagt
gcacagtttgcattgagactccttgcattccgccagatacacaaagttctgggcatggat
ccactaccccaaatgagccaacgttttaacatccacaacaacaggaaacgaagaagggat
agtgatggagttgatggatttgaagctgaggggaaaaaagacaaaaaggattatgataac
ttttaa
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