Phocoena sinus (vaquita): 116751023
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Entry
116751023 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 25-like
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04657
IL-17 signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
116751023
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116751023
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116751023
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116751023
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116751023
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116751023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UBA_4
Motif
Other DBs
NCBI-GeneID:
116751023
NCBI-ProteinID:
XP_032482399
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All DBs
Position
3:complement(49792551..49796200)
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AA seq
897 aa
AA seq
DB search
MTVEQNMLQHSAAQKRQXTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKNAK
TPQQEETTYYQTALPGNDRYISMGSQADTYVIDLTGDDKDDLKRAITLSLAESNRAFRET
GITDEEQAISRVLEASIAENKACLKRTPTGVWRDSRNPYDRKRQDKAPVGLKNIGNTCWF
SAVIQSLFNLLELRRLVLNYKPPSNVQDLPRNQKEHRNLPFMRELRYLVALLVGTKRKHV
DPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQMKAEEETDEGKPKNPMVELFY
GRFLAVGVLEGKKFENTVMFGQYPLQVNGFKDLHECLEAAMIEGETESLHSENSGKSGQE
HWFTELPPVLMFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRNMPRNREITRIKREEIK
RLKDYLTVLQQRLERYLSYGSGPKRFPLVDXYVLEVASSKPVCTSPVDDIDASSPSSGSV
PSQTLPSKTDQQGAPSLELPSTSPASIVAISSRSVIHKPLTQSQIPPDLPMQPAPRHITE
EELSVLESCLHRWRTEIENDIRDLQESISRIHHTIELMYSDKSMIRVPHRLHAVLVHEGQ
ANAGHYWAYIFDRRENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYINDKPQFL
IQEEFNKETGQALVGIETLPPDLKDFVEEDNQRFEKELEEWDAQLAQKALQEKLLASQKL
RESESSVTTAQAGEPEYLEQPSRSDFSRHLKEETIRIITKASHEHEDKSPETVLQSAIKL
EYSRLVKLAQEDTPPETDYRLHHVVVYFIQNQVPKKITEKTLLEQFGDRNLSFDESCHNI
MKVAQAKIDMIKPEEVNLEEYEEWHEDYRKFRETTIYLIIGLENFQRESYIPLPPMG
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaacatgctgcagcacagcgcggcgcagaagcgccagtagacgttt
ttgaaccagctgagagaaattactgggattaatgatgcccagatattacagcaagccttg
aaggatagtaacggaaacttggaactagcagtggctttccttactgcgaagaatgccaag
acccctcagcaggaggagacaacttactaccaaacagcgctacctggcaatgatagatac
atcagtatgggaagccaagcagatacttatgtgattgatctcactggagatgataaagat
gatcttaagagagcaattaccttgagtttggcagaatcaaacagggcattcagggagact
ggaataacggatgaggagcaagccattagcagagttcttgaagccagcatagcagaaaat
aaagcatgtttgaagaggacacctactggagtttggagagattctcgaaacccttatgat
agaaaaaggcaggacaaagctcctgttggactaaagaatattggcaatacttgctggttt
agtgctgttattcagtcattattcaatcttttggaacttagaagactagttctgaattac
aagcctccatcaaatgttcaagatttaccccgaaaccaaaaggagcatcggaatttgcct
tttatgcgtgagcttcggtatctagttgcacttcttgttggtactaaaaggaaacatgtt
gatccatcaagagcagttgaaattcttaaggatgctttcaaatcaaatgactcccagcag
caagacgtgagtgagtttacacacaaattattagattggttagaagatgccttccaaatg
aaagctgaagaagagacggatgaagggaagccaaagaaccccatggtagagttgttctac
ggaagattcctagccgtgggagtgcttgaaggtaaaaaatttgaaaatactgtaatgttt
ggtcagtacccacttcaggtgaatggattcaaagacctacatgagtgcctagaagctgcc
atgattgaaggagaaactgagtctttacattcagaaaattcaggaaagtctggccaagag
cattggtttactgaactaccacctgtgttaatgtttgaattgtcaagatttgaatttaat
caggcattgggaagaccagaaaaaattcacaacaaattggaatttcctcaagttttatat
ctggacagaaacatgcctagaaacagagaaataacaagaattaagagggaagagatcaag
agactaaaagattacctcacagtattacaacagagactcgaaaggtatttaagctatggt
tcgggtcccaaacgattccccttggtggatnngtatgtgttggaagttgcctcgagtaaa
cctgtttgcacttctcctgttgatgatattgatgctagttccccatctagtggttctgta
ccatcacagacattaccaagtaaaacagaccagcagggagctccttctttagaactgcca
agcacatcacccgcatcaatagttgccatttcgtcgagatcagtaatacacaaaccactc
actcagtctcagatacctccagatctgcccatgcaaccagcaccaaggcacataacagaa
gaggaactctctgtgctagaaagctgtttacatcgctggaggacagaaatagaaaatgac
atcagagatttgcaggaaagcatatctagaatccatcacacaattgaactaatgtactct
gacaaatctatgatacgagttcctcatcgcttacatgctgttttagttcatgaaggccaa
gctaatgccgggcactactgggcatacatttttgatcgtcgtgaaaacaggtggatgaag
tacaatgatattgctgtaacaaaatcatcatgggaagagctagtgagggactcttttggt
ggttatagaaatgccagtgcatactgtttaatgtacataaatgataagccacaattctta
atacaagaggagtttaataaagaaactgggcaggcccttgttggaatagaaacactacca
ccagacttaaaagattttgttgaggaagacaaccagcgatttgagaaagaactggaagaa
tgggatgcacagcttgcccagaaagctttgcaggaaaaacttttagcatctcagaaattg
agagagtcagagtcttctgtgacaacagcacaagcaggagaaccagaatatctagagcag
ccatcaagaagtgatttctcaagacacttgaaagaagaaactattcgaataattaccaag
gcatcacatgagcatgaagataaaagtcctgaaacagttttacagtcggcaattaagttg
gaatattcaaggttggttaaattggcccaagaagacaccccaccagaaacagactatcgt
ttacatcatgtagtagtctactttatccagaatcaggttccaaagaaaatcactgagaaa
acattgctagaacaatttggagatagaaatttgagttttgatgaaagctgtcacaacata
atgaaagttgctcaagccaaaattgacatgataaaacctgaagaagtaaacttggaggag
tatgaggaatggcatgaggattatagaaaattcagggaaacaaccatatatctcataatt
gggctagaaaattttcaaagagaaagttatatccctctgcctcccatgggttag
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