Phocoena sinus (vaquita): 116751083
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Entry
116751083 CDS
T07759
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116751083 (DDX4)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116751083 (DDX4)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116751083 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
116751083
NCBI-ProteinID:
XP_032482433
Ensembl:
ENSPSNG00000008161
LinkDB
All DBs
Position
3:complement(130508571..130578942)
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AA seq
737 aa
AA seq
DB search
MKIELEATMGDEDWEAEIIKPRMSSYVPVFEKDRYSSGANGDTFNRTLASLSEMDDGSSR
RDHFMRSRFAAGRSLGNRDPGESNTRENTSTVGGFRVGRSFGNRGFSNNKFEEGDSSGFW
RESNNDREDNQTRNRGFSKRGGCQDGNDSEASGSSRRGGRGIFRGCCGGFVLGSPNSKYE
QDEGTQHTGGIFGSRRLALTGVGKGDTYQSRSGSGSGRGGYKGLNEEIITGSGKNSWKSE
AKGGESGDTQGPKVTYIPPPPPEDENSIFAHYQTGINFDKYDAILVEVSGHDVPPAILTF
EEANLCQTLNSNIAKAGYTKLTPVQKYSIPIILGGRDLMACAQTGSGKTAAFLLPILAHM
MRDGVTASRFKELQEPECIIVAPTRELISQIYLEARKFSFGTCVRAVAIYGGTQLGHSIR
QIVQGCNILCATPGRLMDIIRKEKIGLRQVKYIVLDEADRMLDMGFGPEMKKLISCPGMP
SKEQRQTLMFSATFPEEIQRLAGEFLKSDYLFVAVGQVGGACRDVQQTILQVGQYSKREK
LVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGK
CLALVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDPESDG
HLAQPLVKVLSDAQQDVPAWLEEMAFSIYVTGFSGSTRGNMFVSIDTRKNYQGKSSLNTA
RFSSSQAPNPVDDESWD
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagaactggaagccaccatgggagatgaagattgggaagcagaaataatcaaa
cctcgtatgtcttcctatgttcctgtatttgagaaggataggtattcttctggagcaaat
ggagacacttttaacaggactctggcttcattgtcagaaatggatgatggatcttctcga
agagatcatttcatgagaagcagatttgctgctgggaggagtttgggaaacagggatcct
ggcgagtctaatacaagagagaatacatccacagtgggtggctttagagttggaaggagt
tttggaaacagaggtttttcaaataacaagtttgaagaaggtgatagctctggtttctgg
agagagtctaacaatgaccgtgaagataatcaaacacggaacagagggttttccaagaga
ggcggctgtcaagatggaaatgattcagaagcttcagggtcatccagaagaggtggaaga
ggtattttccgaggttgctgtggaggatttgttctaggaagtccaaatagcaaatatgaa
caagatgaggggacccagcacactggtggcatttttggctctagaagattagcattaact
ggtgtaggtaagggtgacacttatcaaagcagaagtggtagtggaagtggacgaggtggt
tacaaaggtttaaatgaagaaataattacaggctctggaaagaattcttggaagtcagaa
gctaaaggaggagaaagtggtgacactcaaggaccaaaagtgacctacataccacctcct
ccacctgaggatgagaactccatctttgcacattatcagacaggcataaactttgacaaa
tatgatgctattcttgtagaagtatctggacatgatgtaccaccagcaattctgactttt
gaagaagctaatctttgtcagacactgaatagcaacattgctaaagctggttatactaag
cttactcctgtgcaaaaatacagtattcctattatactaggaggaagagatttgatggct
tgtgctcagacagggtctggaaagactgcagcttttctcttgccaattttggctcatatg
atgcgtgatggagtaactgccagtcgttttaaagagctgcaggaaccagagtgtattatt
gtcgcaccaacccgagaattgatcagtcagatctatttggaagccagaaaattttctttt
gggacttgtgtaagagctgttgctatatatgggggaacccagttggggcattccattcga
caaatagtacaaggctgtaatatattatgtgctactcctgggagactgatggatatcata
cgtaaagaaaagattggtctcagacaagtcaaatatatagttttggatgaagctgatcgc
atgctggatatgggttttggaccagaaatgaagaagttaatttcctgcccaggaatgcca
tcaaaggaacagcgtcagacccttatgtttagcgcaacttttccagaagaaattcaaagg
ttggctggggagtttttaaagtcggattatttgtttgttgctgttggacaagtgggtgga
gcatgtagagatgttcagcagaccattctccaagttggccagtactcaaaaagagaaaaa
cttgtcgaaattctacgaaacataggagatgaaagaactatggtctttgttgaaaccaag
aaaaaagcagattttattgccacttttctttgtcaagaaaaaatatcaacaacaagtatt
catggtgatcgagaacagagagagagagaacaagcccttggagatttccgctgtggaaag
tgcctagctcttgttgctacttcagtagctgcccgagggctggatattgaaaatgttcag
catgttatcaattttgatctcccttctaccattgatgaatacgttcatcgaattgggcgt
actggtcgttgtggaaatactggcagagctatttccttttttgatcctgaatcagatggc
catttagcacagcctctagtgaaagtactgtcagatgctcaacaggatgttcctgcatgg
ttggaagaaatggcctttagtatatatgttactggcttcagtggtagtacaagaggaaat
atgtttgtatcaattgatactagaaagaattaccagggcaagagctctttgaacacagca
cggttttcttcttcacaagctcctaatccagtagatgatgagtcatgggattaa
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