Phocoena sinus (vaquita): 116751194
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Entry
116751194 CDS
T07759
Symbol
SEC24A
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116751194 (SEC24A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116751194 (SEC24A)
Membrane trafficking [BR:
psiu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116751194 (SEC24A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
TOR1L1_N
Sen15
Motif
Other DBs
NCBI-GeneID:
116751194
NCBI-ProteinID:
XP_032482603
Ensembl:
ENSPSNG00000019616
UniProt:
A0A8C9E8B8
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All DBs
Position
3:complement(59993014..60054784)
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AA seq
1097 aa
AA seq
DB search
MSQPGIPASGGTPIGLQAQNGAARASGSPYTNGPVQNALMSSQVSVSQGYNSQLPGSYPH
LIPAKTLNPVSGQSNSGGSQTVSPLSNYQGPGQTVYRPSVASNPVTPSLRSGPVPQMPLP
TSQNPAATPMPSGSFLPGANIPPPLNWQYNYSSQTNHCPRASSQPTMSGNANLTTPQYVS
SGDASLQNNFIKSGSAPPLVNTPLPTTFQPGAPLGPPPTGAPPPVRALTPQKSTHRAVPQ
PTFNSASNQEGIIPNTNNGSMVVHNSYDEIEGGGFLATPQLTNKNPTMSQSVGYSYPSLP
PGYQSTIPPSTTGMPPSSLNYPSGPQAFTQTPLGANHLPASMSGLSLHPEGLRVINLLQE
RNMLPLTPLQPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKD
LVQLPVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFMYNPLTRVYGE
PHRRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLL
PGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIEDVFIPMPENLLVNLNESKELVQ
DLLKTLPQMFTKTLETQSALGPALQAAFKLMSPTGGRMSVFQTQLPTLGVGALKPREEPN
QRSSAKEIHLTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSVYYY
PSYHHQHNPVQVQKLQKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSL
PNVNPDAGYAVQMSVEESLNDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNEVFL
GADVQAISGLLANMAVDRSVTASLSDARDALVNAVIDSLSAYRSSVLSNQQHGLMVPFSL
RLFPLFVLALLKQKSFQTGTNACLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEG
AININDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGRNCRQNFLSQVLGVENYAL
IPQTMTDLPELDTPESARTIAFISWLREQRPFYPILYVIRDESPMKANFLQNMVEDRTES
ALSYYEFLLHIQQQVNK
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcccgggataccggcctctggcggcacccccatcggcctccaggcccagaac
ggggccgcccgggcctcggggtctccctacactaacggtcctgtccaaaatgcactgatg
tcttcacaagtgtcagtgagccaaggatataattctcagcttccaggatcctaccctcat
ctaataccagcaaagactttgaatccagtctctggacagtctaactctggtggttcccag
actgtttctccactaagtaattatcagggacctggacagactgtttatagaccatctgtg
gcttctaatccagtgacaccttcactccgtagtggtcctgttccccaaatgccactacct
acttctcagaacccagctgctacaccaatgccttctggtagctttcttcctggagccaac
ataccaccacccttgaattggcaatataactattcgtcacagacaaaccattgtcctcgt
gcatcatcccaaccgaccatgtctgggaatgcaaatttgacaactcctcaatatgtttct
tctggagatgcttcacttcaaaacaacttcataaaatcaggatctgcaccccccttagtg
aatacacctctgcctaccacttttcaaccaggagctcctcttgggccccctccaactgga
gcaccacctccagtgagggcccttacgcctcagaaatcaacacatagagctgtgccccag
cccacctttaattcagctagcaaccaagaaggtattataccaaataccaataatggatct
atggtggttcacaatagttatgatgaaattgaaggcggtggcttcttggcaacaccacag
cttactaataagaatcctacaatgagccaaagtgttggatattcatatccctccttacca
cctggttatcagagcacaataccacctagtacaacaggaatgccaccctcttccttgaat
tatccaagtggtccacaggcatttactcagactcctttaggtgctaatcatttacctgca
agcatgagtggattaagtctacatccagaggggctaagggttatcaatctacttcaagaa
agaaacatgcttccattgacacctttgcagcctcctgttccaaatttgcatgaagatatt
cagaaactcaactgtaacccagagttattccgatgcacactgactagcattcctcagact
caggccttactgaataaagccaaacttcctctgggactgctgcttcatccttttaaagac
ctagtgcaattgcctgtggttacctctagtacaattgtgagatgccgttcatgcaggaca
tacatcaacccttttgtcagctttcttgatcaaaggagatggaaatgtaacttatgttac
cgagtcaatgatgttcctgaagaattcatgtacaaccctttgaccagagtctatggagaa
cctcatagaagacctgaagttcaaaatgctactattgagtttatggctccttcagaatac
atgttacgaccacctcaacctccagtgtacctttttgtatttgatgtgtctcacaatgca
gttgaaactggatacttgaattcagtttgccagagtttgttagacaatctggatttgctt
cctggcaacactaggacaaaaattggcttcataacatttgatagtacaatccacttctac
agccttcaagaaggtctatctcaacctcagatgctaatagtttcagatattgaagatgtt
tttatacctatgccagagaacttattagtaaatttaaatgaaagtaaagagctcgtccaa
gatttactgaaaactttgccgcaaatgttcaccaagaccctggagacccagagtgccttg
ggtccagcccttcaggctgcctttaagctgatgtccccaactggtggtcgaatgtctgtt
tttcaaacacaactcccaactcttggagtgggagccctgaaaccacgagaggaacccaac
cagaggtcatctgctaaggaaattcacttgacaccatcaactgacttctataagaaatta
gccttggactgttctggtcagcaggtagctgttgacttattccttctcagtggacagtat
tctgatttggcttctctgggttgtatttctcggtattcagcaggtagtgtctattattat
ccctcttatcaccatcagcacaacccagtgcaagtgcagaaattacagaaggaactacag
agatacctcactcggaagattggctttgaggccgtcatgaggattcggtgcaccaaaggt
ctttccattcatactttccatgggaacttctttgttcggtccacagacttactgtcttta
cctaatgtaaacccagatgctgggtatgcagtacaaatgtcagtggaagagagtcttaat
gacactcagttggtttcctttcagtcagcactcttgtatacatccagcaaaggtgaaaga
agaattcgtgttcatactttgtgtttgccagtagtttcaactctaaatgaagtctttctt
ggagctgatgttcaagcaatttcagggctattggccaatatggctgttgacaggtctgtg
actgccagtctgagtgatgctcgggacgccctagtgaatgctgtcatagactctctttca
gcttatcgttcttcagtcctaagtaaccagcagcatggacttatggttcctttttctttg
cggcttttcccactgtttgtgttggctctccttaaacagaaatcatttcagactgggaca
aatgcatgtctagatgaacgcatttttgctatgtgtcaagtgaaaaatcagcctttggtt
taccttatgctcacaactcatcccagtttgtatagagttgacaatctctcagatgagggt
gcaatcaacatcaatgatcgcactatacctcagccacctattcttcagctttcagtggag
aagctgagcagggatggagctttcctcatggatgcaggctctgtactaatgctttgggtt
ggaagaaattgtcgacagaattttctcagtcaagttctaggagttgaaaactatgcatta
attccacagactatgacagaccttccagaacttgatacaccagaatctgccagaacaata
gctttcatctcttggcttagagaacagagaccattttacccaatactttatgtaataagg
gatgagagtccaatgaaagcaaacttccttcaaaacatggtagaagacagaacagaatct
gcattatcatattatgaattcctcttgcatatacaacagcaagtgaataaatga
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