Phocoena sinus (vaquita): 116751201
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Entry
116751201 CDS
T07759
Symbol
BDP1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116751201 (BDP1)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
116751201 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
116751201
NCBI-ProteinID:
XP_032482630
LinkDB
All DBs
Position
3:complement(117312770..117402108)
Genome browser
AA seq
2408 aa
AA seq
DB search
MFRRARLSVKPNVRPGAGARGSTAPNPQREREAPRPPEPAAASVPKPAESTDVPPVDCGE
KELREKIPKSSDEKTDGGKDVEESSKSSSTVSQRRKRVSSTFSLVKPSVSVPSEPHPLST
VNQEAPQPNPVPTKEKQPCSDRYRIYKAQKLREMLKEELRKEKKQWKNKYAVNESQRPPD
RSKMTMRDFIYYLPNNNPMTSSLEQEKKTEKSLTPVQTREQEGKSTPDGEDNEEIEEEMD
DGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYY
SKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEK
RPFDFDFFAHLLQKVLAEEEKRKQKSVKNQTLKEKKSSKSRKNVKVKKVSSERVNDNPDE
SVSTRISDTEESQKDAQTVEEEEQSLTLSGQDSEQNALEQDINQKKRRRKNQDESSEQEV
NLSGNATVQPGSSKGENHKNKCLSLSPEINEDESNKEQKLPCVQNTDDIVDLSSNEKAEK
RTDPALSPSSQQDAVSVATETSESSTSYLPSLEGGIRALCEVNNAASSCTEEGNVDLKDK
ALETGQTGSIKLKTRGRLQRPKPNLSRAVGKKSVLSQGKTDTENKSLHTETSVEKNHMEK
DKMNTLGISGMENKEKENPEADTASNLSEKICLQEDDQLKAFRPARLMRGLLQRPKPNVG
KAAERKETVTSQEKIRAGVEKNENESCIDGDTPEQMEDQACKNFDCEDITSQSEKKDTSF
QNVQSDEPKALNECLSIQEDNKANKQVQILKTRFQKPKPNIRRRTGRREIFSKEEEVPKE
VLASEEMTTALRETARLETSPREKVPMETNTAKEMESDLKETERKDISPREKIPGMIDVT
VEMETDLRETGREIFPREKITKVTDATEERETDLEETERREISLQENAPEEVDTIGEVKT
GLKETGREISLREKIPEMIDAAEEVETDLEETERREIPTQKKSSELKTIGDEMETDLNKI
GIEISPREKVPVGISATGEREIDLEETGKRDISLMEKVSGKMTAIEETEADLKETGREIS
FRKSRSEEISASEEKVADLEKTGKIDISLRENEPEETGTSRQTESDSLQRGSGDCSAVPS
LNVKDISSEVQSVVDVSVEEKRNSEKEISSQLSHLNISSQTSELDKIEDQRMRSPDVPEQ
FSDINLSKSLPQEQKPFEVKPAPFVRSRFKRPKPNLARAASKRETIEAEKHAPGKKVEAD
KKGTVVIQQNGEQMRTLPSQRDVASLMASTEKDKSDHSQEEAVVLPYVQTEKNLSPSSSC
EPIEESQSTQAQEKELVVSMGTYHINTCEQEMKESAIQTAPPVRGRLQRPSPNLRKVGQR
QVIEKNEAKETIKEERTLQKDETKKFLTVPNSQIAMEIEVVSSKVSEGRMYENQSHVLLE
NLHVNKINISDEKTRHEHKTYVSSPPQMIRSQFQKAKPYLGRAQGKKEESGIGTDRADQS
KARKPEDNLLQHGDSDTQLLPKGKAEFLTSLEISARKGSVGSKEIGLAKKDAQSEVGPSG
SVGEKTVGDNSMCSVVEEQYVSKPASSPQLLKESNYSKIAVDRRTALSSASECKIDRSER
RMRRKIKPNVPKGRGSKRIRSKTSKKEPRASKPVLVTLRASQEEDEDDAEDFESDYEEES
YHLAPEEVNKAPVFVPVGLRSPEPVSAQIEETMEELEIPMNIPDVGCIAVVEHQLSSNID
LTTEEMKQEENLNALSIEMTTGEHSQAETGTNDGSTEAAITLLTMGGLVLQSEISTEQSD
GVCVLPDVHSNDKTHIPFCPDSTNLKIVHECQEHSSPIHSASPSVEENKIILDEQSTKEE
IGLMEEVKETSISSRTTSEVTSNLRMRSRFAKPKPNLKKILGTSRFGAHREVPSLFVTKE
VEIQRETEKNASKGRELEDKNLESVTTAESKEQSKLASVHGIEETSISQETRLTGRDEDE
EGRSAEVQLSSVAPVVSSESMPHTLGLGMGLGESSVEEPLEKDSNGDSVLILHVPECSIP
EVQQENINNPQDLTVANVHQEGEDEQAFILTLVEIPTNAVEEFADTTMQLMPNPLLPAPI
LVKSVNTEERGDMSISFPVTSAGQDDMCLSNSGRDDSKKPPANLDLVSRKRFHCRLDESD
HVPPAKKSSLTLRDACQKYTSEVCSKEVINVLEKTGESYKGQGIFPTSGNTHTIPEPQKE
QLEPTFQSIRSKPLDKITDTQEKNTSQLPQDEIGVSDKEKRTCAASKSEQMDSITSSSKT
PLSRPGRRPLGFLSLICSKNSLESDEPTQVRSKKRLKPLIPVSRQNLKRSNPLNTSQKKT
QESSDLPSPSVVNTQPKNIDSSATQVSCNHPLPKGECKDVPNRLPEEEPMTVSEYFFSDI
FIEVDETE
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcagggcacgccttagcgtgaagcccaatgtcaggcctggagcaggcgccagg
ggctccaccgcccccaatccacagcgtgaacgagaggctcccaggccgccggagcctgca
gcggcctctgtcccgaagccagcggaatccacagatgtgcccccggtggattgtggggaa
aaggagctccgagaaaagattcccaagagcagtgatgaaaagactgatggtgggaaggat
gttgaagaatccagtaaatcttcctctactgtttcacagagaagaaagcgagtatcaagt
acttttagtctggttaaacctagtgtcagtgttccttcagaacctcatcctttatctaca
gttaatcaagaagctccacagccaaaccctgttccaacaaaagagaaacagccatgctca
gacagataccgaatatataaagcccagaaactgagagaaatgttaaaagaagaattgagg
aaagagaagaagcaatggaaaaacaaatatgctgtaaatgaaagtcagaggccaccagat
cgttccaaaatgactatgagagacttcatatattacctgccaaataacaatccaatgact
tcttcactggagcaagaaaagaaaactgaaaaatcattgacaccagtccagacaagagag
caagaaggtaagagtactcctgatggtgaagataatgaagaaatagaagaggagatggat
gatgggccattgctggttcctcgagtaaaagtggcagaagatggttctattattttggat
gaagaaagtttaactgtagaagttttaaggaccaaaggcccctgtgtagttgaggaaaat
gaccccatatttgagcgtggttctacaactacatactccagctttaggaaaaactattac
tctaaaccatggtcaaataaagaaacagatatgtttttcttagccatcagcatggtagga
actgacttttctatgattggacagctttttcctcacagagcaaggatagaaattaagaat
aaatttaaacgtgaagagaaaacaaatggatggagaatagacaaagcattccaggaaaag
cgcccttttgacttcgatttttttgctcatttgcttcagaaagttcttgctgaagaagag
aaaagaaaacaaaaatctgttaaaaatcagactttaaaggagaagaagtcctctaaatca
cggaaaaatgtaaaagtgaaaaaagtctccagtgaaagagtgaatgataatccagatgag
tctgtgagcactagaatttcagacacagaagaatctcaaaaggatgctcagacagttgaa
gaagaagaacagtctctgactttatcaggacaggattcagaacagaatgcattagaacaa
gatataaatcaaaagaaaaggagaagaaagaatcaggatgaaagtagtgaacaagaggta
aatctttcaggaaatgccactgttcagccaggctcttctaaaggagaaaaccacaaaaat
aaatgcctgtctttaagtcctgagataaatgaagatgaaagcaataaggaacaaaagctt
ccctgtgtacagaacacagatgacattgtggatctatcctctaatgaaaaggctgagaaa
agaactgaccctgctctttcaccaagtagtcaacaagatgccgtatcagtagcaactgag
acttcagaatcaagcacttcatatttgccttcattagaaggtggaattagagcattgtgt
gaggtgaataatgctgcgagtagttgtacagaagaaggaaatgttgacctaaaagataaa
gcactggaaactggtcagacaggaagtattaaactgaagacaagaggacgactccagaga
cctaaacccaatttatcaagggcagttgggaagaaatcagttctttcacaagggaaaaca
gatacagagaacaagagtttacatacagaaacttcagttgaaaagaatcatatggaaaag
gataaaatgaatacacttggtatttctggaatggagaataaagagaaagagaatccagag
gctgatactgcatctaatttgagtgaaaaaatttgtctgcaggaagatgatcaactaaag
gctttcagacctgcacgcctaatgaggggcttattgcaaaggccaaagccaaatgtaggt
aaagctgctgaaagaaaagaaactgttacatcacaggaaaaaattagggccggtgtagaa
aagaatgaaaatgagtcctgtatcgatggagatactcctgaacaaatggaagatcaggca
tgtaaaaattttgattgtgaagacatcacatcacaatctgaaaaaaaagatacttctttt
caaaatgtgcagtcagatgagcccaaggctcttaatgaatgtctgagtattcaagaggat
aataaagcaaataaacaagttcaaattctgaagactcgatttcagaaaccaaagccaaat
ataagaagaagaactggaagaagagaaattttctcaaaggaagaagaggtaccaaaggag
gttcttgcctctgaggagatgacaacagctttgagagaaactgcaagattggaaacctca
ccaagggaaaaggtacctatggagactaatactgctaaggaaatggagtcagatttaaaa
gaaactgaaaggaaagatatctctcccagggagaaaataccaggaatgattgatgtcact
gtggaaatggagacagatttgagagagactggaagagagattttcccaagggagaagata
acaaaggtgactgatgccactgaggaaagagagacagatttggaagagactgaacgaaga
gaaatatccctacaggaaaatgccccagaggaggtcgatactattggtgaagtgaagaca
ggtttgaaagaaactggaagagagatttccctaagggagaagataccggagatgattgat
gccgctgaggaagtagagacagatttagaagaaactgaaagaagagaaatacctacacaa
aagaagtcctcagagctcaaaactataggtgatgaaatggagacagatttgaacaaaatt
ggaatagaaatttccccaagggaaaaggtaccagtggggatcagtgccacaggggaaagg
gagattgatttggaagaaactggaaaaagagacatttccctgatggaaaaggtatcagga
aagatgactgccattgaggaaacagaggcagatttgaaagaaactggaagagaaatttcc
tttaggaaaagccgatcagaagagatcagtgcttctgaggaaaaggtggcagatttggaa
aaaactggaaaaatagacatttctctaagggaaaatgaaccagaggagactgggacctca
agacaaactgagtcagattcattgcagaggggtagtggtgactgcagtgctgtgccttca
ctaaatgttaaagacattagcagtgaagtacaatccgtggtggatgtatctgtagaagaa
aaaagaaattctgaaaaggaaatatcaagtcagttgagtcatttgaacatttcttcacag
acatctgaacttgataaaatagaagaccagaggatgcgatctccagatgttccagagcag
ttttcagatattaatttaagcaaatctcttcctcaagaacagaagccatttgaagtgaaa
ccagcaccttttgtgagaagtagattcaaaagaccaaaaccaaacttagcaagagcagct
tcaaaaagagagactatagaagcagaaaaacatgcacctgggaagaaagtggaagctgat
aaaaaagggactgttgtgatacagcagaatggggaacaaatgagaactctcccttctcaa
cgtgatgtggcttccctaatggcatcaacagaaaaagacaaatcagatcacagtcaagag
gaggctgtggtattaccatatgtacagactgaaaagaacctttccccttcgagttcttgt
gaacctatagaggagtctcagtctacacaagcccaggaaaaggaattagttgtctctatg
gggacttatcatataaacacttgtgaacaagaaatgaaggaaagcgctatccaaactgct
ccaccagtaaggggccgacttcagagacccagtccaaacttaagaaaggttggacagagg
caagtaatagaaaaaaatgaagccaaagaaacaattaaggaagaaaggacactacaaaaa
gatgaaactaaaaaattcctgactgtgccaaattctcaaattgcaatggaaattgaagtt
gtatcctccaaagtttcagaaggcagaatgtatgaaaaccagagtcacgttcttttagaa
aaccttcatgttaacaaaataaatatttcagatgaaaagacgagacatgaacataaaacg
tatgtttctagtccaccacaaatgataagaagccaattccaaaaggctaagccatatttg
ggaagagcacaaggtaagaaagaggaatcaggcataggaacagacagagcagatcagagt
aaggcaaggaagccagaagataatttgctgcagcatggagattctgacacccagcttctt
ccaaaaggaaaagctgagtttctgacatctctggagatttcagcaagaaaaggttctgta
ggttccaaggagattggtttggcaaaaaaagatgctcaatcagaagttggaccgtcagga
agtgttggagagaagaccgtaggcgataattctatgtgttcagttgtcgaagagcagtat
gtcagtaaaccagcaagctctccacaactgttaaaagaatcaaattattctaaaattgct
gtggatcgaagaacagctctctcttctgcctctgaatgtaagatagatcgtagtgaaagg
agaatgcgtcgaaagattaaaccaaacgtccccaaagggcgtggatcaaaacgaattcgg
agtaagacctctaagaaggaacctagagcttctaagcctgtgctggtgactcttcgagct
tcccaggaagaagacgaagatgatgcggaagactttgagtctgactatgaagaagaaagc
tatcatcttgctccagaagaagtaaacaaagctccagtgtttgtacctgttggtctcaga
tctcctgaaccggtttctgctcagattgaagaaaccatggaagagcttgaaatacccatg
aatatcccagatgtaggatgcatagctgttgttgaacatcagctctcatcaaacatagat
ttgactactgaggaaatgaaacaagaagaaaatctgaatgcattatcaattgaaatgacc
acaggtgaacattcccaagctgaaacaggtaccaacgatggaagcactgaagctgccata
actttacttacaatgggaggtctggtgttgcagtcagagatcagtacagaacagagtgat
ggagtatgtgtacttcctgatgttcattcaaacgataaaacccatattcctttttgccca
gatagtacaaatctcaaaattgttcatgaatgtcaggaacattcttcacctatccatagt
gcatctccatcagtagaagaaaacaagattatattggatgaacaaagtactaaagaagaa
attggtttaatggaagaagtaaaggaaacctctatatcgtccaggacaacttcagaagtg
accagtaatttgagaatgagaagtagatttgccaagcctaagccaaatcttaagaaaatt
ttagggaccagcaggtttggtgctcatcgggaagttcccagtttgtttgtaactaaagaa
gtggaaattcaaagagaaactgagaaaaatgcttctaaagggagagaattagaagataaa
aaccttgaatcagttacaacagcagagagtaaggagcagagcaaattggcatctgtacac
ggtattgaagaaaccagtatttcacaagaaacacgcctaactggaagagatgaagatgaa
gaagggaggtctgcagaggttcagctgtcttcagttgctcctgttgtttcgtctgagtca
atgccccacacacttggtttgggtatgggtcttggtgagagttctgtcgaagagcccctg
gaaaaggactctaacggagacagtgtgcttatacttcatgtgccagagtgtagtattcca
gaagtccaacaagagaatataaacaatcctcaagacctaacagttgctaatgtacatcaa
gaaggtgaggatgaacaagcattcattttaactctggtggaaatcccaaccaatgcagta
gaagaatttgctgataccactatgcagttaatgccaaaccctttactgccagcccccata
ttggtcaaatcagtgaatacagaagaaaggggggacatgagtatcagttttccagtaact
tcagctggtcaggatgacatgtgtttatctaattctggaagagatgattccaaaaagcct
cctgctaatttggatcttgtatctaggaagagatttcactgtaggcttgatgaaagtgac
catgttcctcctgccaaaaaaagttcactcactttaagagatgcttgtcaaaaatatacc
tctgaggtgtgttcaaaggaagtaatcaatgttttggagaaaacaggagagtcttacaag
ggacaaggtatcttccctacctcaggaaacacacatacaattccagaacctcagaaagag
caacttgaaccaacttttcagagtatcagatctaaacctcttgataaaataacagataca
caagaaaagaatacatctcagttacctcaggatgagataggggtgtctgataaggaaaaa
agaacttgtgctgcttctaagtctgaacaaatggatagcatcacatcgtcttcaaaaacc
ccactatccagacctggcagaagacccctgggatttttgtctttaatatgttcaaagaat
agtttggagtctgatgaacctactcaggttcgtagcaagaaacgcctgaaacctcttata
cctgtatcaagacagaatctgaaaagatctaatccgctcaatacaagccagaaaaaaact
caagagtcctctgatcttccatctccaagtgttgttaatactcaacctaaaaatattgat
agttcagcaactcaggtttcttgtaatcatcccttaccgaaaggagaatgtaaagatgtc
ccaaaccggctaccggaagaggagccaatgacagtctctgaatatttctttagtgatatc
tttattgaagtggatgaaacagaataa
DBGET
integrated database retrieval system
