Phocoena sinus (vaquita): 116751216
Help
Entry
116751216 CDS
T07759
Symbol
DCP2
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116751216 (DCP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116751216 (DCP2)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
116751216 (DCP2)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116751216 (DCP2)
mRNA degradation factors
5'-3' decay
Decapping complex
116751216 (DCP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
116751216
NCBI-ProteinID:
XP_032482670
Ensembl:
ENSPSNG00000000895
LinkDB
All DBs
Position
3:80862626..80920637
Genome browser
AA seq
452 aa
AA seq
DB search
METKRVEIPCSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQC
GIRDFAKAVFSHCPFLLPQGEDVEKILDEWKEYKMGVPTYGAIILDETLENVLLVQGYLA
KSGWGFPKGKVNKEEAPHDCAARELLKKKESCHLRYGWTLRALCKMKYVRQRQVFEETGF
DIKDYICKDDYIELRINDQLARLYIIPGIPKDTKFNPKTRREIRNIEWFSIEKLPCHRND
MTPKSKLGLAPNKFFMAIPFIRPLRDWLSRRFGDSSDSDNGFSSAGSTPAKPTVEKLSRT
KFRHSQQLFPEGSPGDQWVKHRQPLQQKPYNNNHSEMSDLLKAKSQSMRGNGRKQYQESP
NQKKRTNGVHSQPGKQQNPLMKCEKKLHPRKLQDTFETDAVYDLPCSGEDQLLEHAEGQS
VACNGRCKFPFSSRAFLSFKFDHNAIMKILDL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggagactaaacgggtggagattccctgcagcgtcctggacgatctctgcagccgattt
attttgcatattcccagcgaggaaagagacaatgctatccgagtgtgttttcagattgaa
cttgcccattggttttacttggatttctacatgcagaacacaccaggattacctcagtgt
gggataagagactttgctaaagctgtcttcagtcattgtccatttttgctgcctcaaggt
gaagatgtggaaaaaattttggatgaatggaaagaatataaaatgggagtgccaacatat
ggtgcaattattcttgatgagacacttgaaaatgtattactggttcaggggtacctagca
aaatcaggctggggatttccaaaaggaaaagtaaataaagaagaagctcctcatgattgt
gctgctagagagctgttaaaaaaaaaagaatcctgccatttgcgctatggatggacattg
agagcattatgcaaaatgaaatacgtcagacaaagacaggtctttgaagaaactggtttt
gatattaaagattatatttgtaaggatgattacattgaactccgaatcaatgaccagctt
gctcgtttgtacatcattccaggaattccaaaagataccaaatttaacccgaaaaccaga
agagaaattcggaacattgagtggttctccattgagaaattgccctgtcatagaaatgat
atgaccccaaaatccaaacttggtttggcaccaaacaaattttttatggccattcctttt
atcagaccattaagggactggctttctcgaagatttggcgattcctcagatagcgacaat
ggattttcctcagctggtagcacaccagctaaacccactgtggaaaaattgagtcgaacc
aaattccgccacagtcagcaattatttcctgaaggttctcccggtgaccagtgggtaaag
cacaggcaaccactgcaacaaaaaccatataataataatcattctgaaatgtctgacctt
ttaaaagcaaagagtcaaagtatgaggggaaatggcagaaaacagtatcaagagtcacct
aatcaaaagaaaagaacaaatggggtccacagccagccaggcaagcagcagaatcccttg
atgaaatgtgaaaaaaaacttcatccacgaaagcttcaggatacttttgaaacagatgct
gtatatgacttaccttgctccggtgaagaccagttgctagaacatgccgagggccagtct
gtggcatgtaatggacgttgcaagttccccttttcatccagagcctttttgagtttcaag
tttgaccataatgctataatgaaaatcttggacctttga
DBGET
integrated database retrieval system
