Phocoena sinus (vaquita): 116751231
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Entry
116751231 CDS
T07759
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116751231 (PTBP2)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116751231 (PTBP2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
116751231
NCBI-ProteinID:
XP_032482700
Ensembl:
ENSPSNG00000019592
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All DBs
Position
1:86263402..86346649
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AA seq
537 aa
AA seq
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MDGIVTEVAVGVKRGSDELLSGSVLSSPNSNMSSMVVTANGNDSKKFKGEDKMDGAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPH
LRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPV
LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG
QNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSL
LGLPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSL
FTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTV
QLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLF
ANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggaattgtcactgaagttgcagttggcgtgaagagaggatctgacgaactactc
tcaggcagtgttctcagtagtccaaactctaacatgagcagcatggtggttacagccaat
ggtaatgatagtaaaaaatttaaaggagaagataaaatggatggtgctccttctcgtgta
cttcatattcgaaaattacctggtgaagtgacagaaactgaagttattgctttaggctta
ccttttggtaaggtgaccaacatccttatgctgaaaggaaaaaatcaggcatttttggaa
ctagcaacagaggaagcagctattactatggttaattactattctgctgtgacacctcac
cttcgtaaccaaccgatttatattcagtactccaatcacaaagaactaaaaacagataat
acattgaaccaacgtgctcaagcagttcttcaagcagtgacagctgtccagacagcaaat
actcctcttagtggcaccacagttagtgagagtgcagtgactccagcccagagtccagtg
cttagaataattattgacaatatgtattaccctgtaacacttgatgttcttcaccaaata
ttttctaagtttggtgctgtattgaagataatcacatttacaaaaaataaccagtttcaa
gctcttctccagtatggcgatccagtaaatgctcagcaagcaaaactagccctagatggt
cagaatatttataatgcttgctgtaccctaaggattgatttttctaaacttgtgaatttg
aatgtaaaatacaacaatgataaaagtagggattatactcgacctgatcttccatctggg
gatggacaacctgcattggacccagctattgctgcagcatttgccaaggagacatctctc
ttagggcttcctgttgcagctgttccaggagctctgagtcctttggctattccaaatgct
gctgcagcagctgctgcagctgctgctggccgagtgggtatgcctggagtctcagctggt
ggcaatacagtcctgttggttagcaatttaaatgaagagatggttacgccccaaagtctg
tttaccctcttcggtgtttatggagatgtgcagcgtgtgaagattttgtacaacaagaaa
gacagtgctctaatacagatggctgatggaaaccaatcacaactggccatgaatcatctt
aatggacagaagatgtatggaaaaattattcgtgttactctgtctaaacatcagactgta
caactacctcgagagggacttgatgatcaagggctaacaaaagattttggtaattcccca
ctgcatcgtttcaagaaacctggatccaaaaattttcagaacatttttcctccttctgca
accctccacctatccaatatccctccttcagtagcagaagaggatctacgaacactgttt
gctaacactgggggcactgtgaaagcatttaagttttttcaaagagatcacaaaatggct
cttcttcagatggcaacagtggaagaagctattcaggccttgattgatcttcataattat
aaccttggtgaaaaccatcatctgagagtgtctttctccaagtcaacaatttaa
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