Phocoena sinus (vaquita): 116751246
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Entry
116751246 CDS
T07759
Symbol
SV2C
Name
(RefSeq) synaptic vesicle glycoprotein 2C isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116751246 (SV2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116751246 (SV2C)
Transporters [BR:
psiu02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
116751246 (SV2C)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
LD_SV2
Pentapeptide_4
MFS_2
Pentapeptide_3
Motif
Other DBs
NCBI-GeneID:
116751246
NCBI-ProteinID:
XP_032482766
Ensembl:
ENSPSNG00000005309
UniProt:
A0A8C9BR03
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Position
3:complement(113161762..113397188)
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AA seq
725 aa
AA seq
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MEDSYKDRTSLMKGAKDIAREVKKQTVKKVNQAVDRAQDEYTQRSYSRFQDEEEDDDYYP
PGETYNGEANDDEGSSEATEGHDEDDEIYEGEYQGIPNMNQGKDSIVAVGQPKGNEYKDR
QELESERRADEEELAQQYELIIQECGHGRFQWALFFVLGMALMADGVEVFVVGFVLPSAE
TDLCIPDSGSGWLGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMSINGFFAFLSSFVQG
YGFFLFCRLLSGFGIGGAIPTVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAI
IPHYGWSFNMGSAYEFHSWRVFIIVCALPCVCSVVALTFMPESPRFLLEVGKHDEAWMIL
KLIHDTNMRARGQPEKVFTVNRIKTPRQIDELIEIESDTGTWYRRCFVRIRTELYGIWLT
FMSCFTYPVKDNTIKLTIVWFTLSFGYYGLSIWFPDVIKHLQSNVLKDVDDPTGKFSNLT
TNFTTTNKIVSGLEWDNGRFEGIRLKSIIFKDSVFKSCTFEDVTSVNTYFKNCMFINTVF
NNTDFEPYKFINCEFQNCTFLHNKTGCYITFEDDYGAYWIYFVNFLGTLAVLPGNIVSAL
LMDRIGRLTMLGGSMVLSGISCFFLWFGTSESMMIGMLCLYNGLTISAWNSLDVVTVELY
PTDRRATGFGFLNALCKAAAVLGNLIFGSLVSITKAIPILLASTVLVCGGLVGLRLPDTR
TQVLM
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggaagactcctataaggataggacttcactgatgaagggtgccaaggacattgccaga
gaggtgaagaaacagactgtaaagaaggtgaatcaagcagtggaccgggcccaggatgaa
tacacccagaggtcctacagtcggttccaagacgaggaagaggatgatgactattaccca
ccgggagaaacctataatggggaggccaatgatgatgaaggctccagtgaagcaactgag
ggtcacgatgaagatgatgaaatctatgaaggggagtatcagggcatccccaacatgaac
caagggaaagacagcattgtggcagtggggcagcccaagggcaatgagtacaaggaccgt
caggagctggaatcagagaggagagctgatgaggaagaactagcccagcagtatgagctg
ataatccaagagtgtggtcacggccgcttccagtgggcccttttctttgtcctgggcatg
gccctgatggcggatggtgtggaggtgtttgttgtgggctttgttttgcccagcgctgag
acagacctgtgcataccagattcaggatccggatggctaggtagcatagtgtacctcggg
atgatggtgggggcattcttctggggaggactggcagacaaagtgggaaggaagcagtct
cttctgatttgcatgtctatcaacggattctttgccttcctttcttcatttgtccaaggt
tatggcttctttctcttctgtcgcttactttctggattcgggattggaggagccattccc
accgtgttctcctactttgctgaagtgctggcccgagagaagcggggtgagcacctgagc
tggctctgcatgttctggatgatcggtggcatctatgcctctgccatggcctgggccatc
atcccacactacggatggagcttcaacatggggtccgcctacgagtttcatagttggcgt
gtgttcatcatcgtctgcgcccttccttgcgtctgctcagtggtggccctcacgttcatg
cctgaaagcccacggttcttgttggaggttggaaaacatgatgaagcctggatgattctg
aagttaattcatgacacaaacatgagagcacggggtcagcctgagaaagtcttcaccgta
aacagaatcaaaaccccaagacaaatagatgagctgatcgaaatcgagagtgacacagga
acatggtacaggaggtgttttgttcggatccgcacagaactgtatggaatttggttgact
tttatgagctgtttcacctacccagtcaaggacaataccataaagcttacgattgtttgg
ttcacgctgtcctttgggtactacggtttatccatttggttccctgatgttattaaacat
ctgcagtcgaatgtgttgaaagatgtagatgatccgacaggaaaattttcaaatttaact
actaactttacaacgacaaataagattgtttctggactggaatgggacaacggcagattc
gaagggatcaggctcaaatccataattttcaaagattcggtttttaagtcctgcaccttt
gaggatgtaacttcagtcaacacctacttcaagaactgcatgtttattaatactgttttt
aacaacacagattttgaaccatataaattcattaactgcgaatttcaaaactgcacattt
ttgcacaacaagacaggatgctacattacctttgaagatgactatggtgcctactggatt
tattttgtcaacttcctggggacattggcagtgttgccagggaacatcgtgtctgctctc
ctaatggacagaatcgggcgcttaacgatgctaggtggctctatggtgctttcggggatc
agctgtttcttcctttggtttggcaccagcgaatccatgatgataggcatgctgtgtctg
tacaatgggttgaccatctcggcctggaactctcttgatgtggtcactgtggagctgtac
cctacagatcggagggcaacaggctttggcttcttgaatgcactgtgcaaagcagcggcc
gtcctcggaaacttaatattcggctccctggtcagcatcaccaaagcaatccccatcctg
ctggcctccaccgtgctcgtgtgtggaggactggtggggttgcgcctgcctgacacacga
acccaggtcctgatgtaa
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