Phocoena sinus (vaquita): 116751259
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Entry
116751259 CDS
T07759
Symbol
MYO1F
Name
(RefSeq) unconventional myosin-If isoform X1
KO
K10356
myosin I
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116751259 (MYO1F)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116751259 (MYO1F)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116751259 (MYO1F)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116751259 (MYO1F)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116751259 (MYO1F)
04147 Exosome [BR:
psiu04147
]
116751259 (MYO1F)
Protein phosphatases and associated proteins [BR:
psiu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116751259 (MYO1F)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Phagocytosis
Others
116751259 (MYO1F)
Others
Actin-binding proteins
Myosins
116751259 (MYO1F)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116751259 (MYO1F)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116751259 (MYO1F)
Exosome [BR:
psiu04147
]
Exosomal proteins
Proteins found in most exosomes
116751259 (MYO1F)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
SH3_9
SH3_1
SH3_2
nSTAND3
ABC_tran
NPHP3_N
AAA_16
RapZ-like_N
IQ
AAA_22
Motif
Other DBs
NCBI-GeneID:
116751259
NCBI-ProteinID:
XP_032482813
Ensembl:
ENSPSNG00000013483
LinkDB
All DBs
Position
3:complement(6476600..6509130)
Genome browser
AA seq
1109 aa
AA seq
DB search
MRLTATPRPHPQGSKERFHWQSHNVKQSGVDDMVLLTQITEDAIVGNLRKRFMDDYIFTY
IGSVLISVNPFKQMPYFTDREIDLYQGAAQYENPPHIYALTDNMYRNMLIDCENQCVIIS
GESGAGKTVAAKYIMGYISKVSGGGEKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFG
KYFEIQFSRGGEPDGGKISNFLLEKSRVVMQNENERNFHIYYQLLEGASQEQRQNLGLMT
PDYYYYLNQADTYKVEGTDDRSDFSETLSAMQVIGIPPNVQQLVLQLVAGILHLGNISFC
EDGNYARVESADLLAFPAYLLGIDSGRLQEKLTSRKMDSRWGGRSESIDVTLNVEQAAYT
RDALAKGLYSRLFDFLVEAINRAMQKPQEEYSIGVLDIYGFEIFQKNGFEQFCINFVNEK
LQQIFIELTLKAEQEEYVQEGIRWTPIQYFNNKIVCDLIENKLNPPGIMSVLDDVCATMH
ATGGGADQTLLQKLQAAVGTHEHFNSWSAGFVIHHYAGKVSYDVNGFCERNRDVLFSDLI
ELMQTSERAFLRMLFPEKLDVEKKGRPSTAGSKIKKQANDLVSTLKRCTPHYIRCIKPNE
TKRPRDWEENRVKHQVEYLGLKENIRVRRAGFAYRRQFAKFLQRYAILTPETWPHWRGDE
RQGVQHLLRAVNMEPDQYQMGSTKVFVKNPESLFLLEEMRERKFDGFARTIQKAWRRHVA
VRKYEEMREEASNILLNKKERRRNSINRNFVGDYLGLEERPELRQFLGKRERVDFADSVN
KYDRRFKAIKRDLILTPKCVYVIGREKVKKGPEKGQVREVLKKKLEIQALRGVSLSTRQD
DFFILQEDAADSFLESVFKTEFVSLLCKRFEEAVRRPLPLTFSDTLQFRVKKEGWGGGGT
RSVTFSRGSGDVAMLKASSRTLSVSVGDGLPKSSKPTRKGMAQGKPRRSAQAPTRAAPGP
PRGLDRNGVPPSARGGPLPLEFTSRRGSQKPPQGPPSSALGASRRQRARPPSEHNTEFLN
VPDQGMAGMQRKRSIGQRPVPGVGRPKPQPRTHGPRCRALYQYVGQDVDELSFNVNEVIE
ILMEDSSGWWKGRLHGQEGLFPGNYVEKI
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcaccgccaccccgcggccccacccccagggcagcaaggagcgtttccactgg
cagagccacaacgtgaagcagagtggtgtggacgacatggtgttgctgacccagatcacc
gaggacgccatcgtgggcaacctccgcaagcgcttcatggacgactacatctttacctac
atcggctccgtgctcatctccgtaaaccccttcaagcagatgccctacttcactgaccgt
gagatcgacctctaccagggcgcggcccagtacgagaatcccccgcacatctatgccctc
acagacaacatgtaccggaacatgctcattgactgtgagaaccagtgtgtcatcatcagc
ggagagagtggagctgggaagacggtggcagctaaatacatcatgggctacatctccaag
gtgtcgggcggaggcgagaaggtccagcatgtgaaggacatcatcctgcaatcaaaccca
ctgctggaagcctttggcaatgccaagactgtgcgcaacaataattccagtcgctttggc
aagtactttgagatccagttcagccgcggtggggagccagatgggggcaagatctccaac
ttcttgctggagaaatcccgagtggtcatgcagaatgaaaacgagaggaacttccacatc
tactaccagctgctggaaggggcttctcaggagcagcggcagaacctgggactcatgacc
cccgactactattactacctcaaccaagcagacacctacaaggtcgaaggcaccgatgac
cggagcgacttcagtgagactctgagcgccatgcaggtcatcgggatcccgcccaatgtc
cagcagctggtcctgcagcttgtggcggggatcttgcacttgggaaacatcagcttctgc
gaagatgggaattatgcccgggtggagagcgcagacctcttggccttccccgcctacctc
ctgggcattgacagcgggcggctgcaggagaagctgaccagccgcaagatggacagccgc
tggggcgggcgcagcgagtccattgacgtgaccttgaacgtggagcaggcggcctacact
cgggacgctctggccaaggggctctactcccgtctcttcgacttcctcgtagaggccatt
aaccgtgccatgcagaagccccaggaggagtatagtatcggtgtgcttgacatctatggc
tttgagatcttccagaaaaacggctttgagcagttctgcatcaacttcgtcaacgagaag
ctacagcagatctttatcgaactcaccctgaaggctgaacaggaggagtacgtacaggag
ggcatccgctggacccccatccagtacttcaataacaaaatcgtctgtgacctcatcgaa
aacaagctgaacccaccgggcatcatgagcgtcctggacgacgtgtgcgccaccatgcac
gccacgggcggcggcgccgaccagacgctgctccagaagctgcaggcggccgtgggcacc
cacgagcacttcaacagctggagtgccggcttcgtcatccaccactacgcgggcaaggta
tcctacgatgtcaacggcttctgtgagaggaaccgtgatgtcctcttctccgacctcata
gagctgatgcagaccagtgagcgggccttcctccggatgctctttcccgagaagctggat
gtagaaaagaagggccgccccagtacagccggctccaagatcaagaaacaagccaacgac
ctggtatccacgctgaagaggtgcaccccccactacatccgctgcatcaagcccaacgag
accaagaggccccgtgattgggaggagaacagggtcaagcaccaggtggagtatctgggc
ctaaaggagaacatcagggtacgccgggcaggcttcgcctaccgccgccagtttgccaag
ttcctgcagagatacgctattctgaccccggagacgtggcctcactggcgtggggacgag
cgtcagggggtccagcacttgctgcgggcggtcaacatggagccagaccagtaccagatg
gggagcaccaaggtcttcgtcaagaaccctgagtccctcttccttctggaggagatgcga
gagcgcaagttcgatggctttgcccgcaccatccagaaggcctggcggcgccacgtggca
gtccggaagtatgaggagatgcgggaggaagcttccaacatcctgctgaacaagaaggag
cggagacggaacagcatcaataggaacttcgttggggactacctggggctggaggagcgg
ccggagctgcgtcagttcctgggcaagagggagcgagtggactttgctgactcggtcaac
aagtatgaccgccgcttcaaggccatcaagagggacttgatcctgacgcccaagtgtgtg
tatgtgatcgggcgggagaaggtgaagaagggacctgagaagggccaggtgcgtgaggtc
ctgaagaagaagctggagatccaggccttacggggagtttccctcagcacgaggcaggac
gacttcttcatcctccaagaagacgcggccgacagctttctggagagcgtcttcaagacc
gagttcgtcagcctcctgtgcaagcgcttcgaggaggcggtgcggaggcccctgcccctc
accttcagcgacacactacagttccgggtgaagaaggagggctggggcggaggtggcacc
cgcagcgtcactttctcccgtggctccggcgacgtggcgatgctcaaggctagcagtcgg
accctctcggtcagcgtgggtgatggactgcccaaaagctccaagcctacacggaaggga
atggcccagggaaaacccagaaggtcggcccaggcccctacccgggcagctcccgggccc
cctagaggcctggatcgcaatggggtgcctccctctgccagagggggccccctacccctg
gagttcacatccagacggggctcccagaagccaccacagggccctccatcctcagccttg
ggggccagcagacgccaacgggcacggcccccctcggagcacaacacagaattcctcaat
gttcctgaccagggcatggctggcatgcagaggaagcgcagcatagggcagagacctgtg
cccggtgtgggccgacctaagccccagccacggacacatggcccaaggtgccgggcactg
taccagtacgtgggccaagatgtggacgagctgagcttcaacgtgaacgaagtcatcgag
atcctcatggaagattcctcaggctggtggaaaggccggctgcatggccaggagggcctt
ttcccaggaaactacgtggagaagatctga
DBGET
integrated database retrieval system
