Phocoena sinus (vaquita): 116751270
Help
Entry
116751270 CDS
T07759
Symbol
DNMT1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00270
Cysteine and methionine metabolism
psiu01100
Metabolic pathways
psiu05206
MicroRNAs in cancer
Module
psiu_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
116751270 (DNMT1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
116751270 (DNMT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116751270 (DNMT1)
03032 DNA replication proteins [BR:
psiu03032
]
116751270 (DNMT1)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116751270 (DNMT1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
psiu02048
]
116751270 (DNMT1)
Enzymes [BR:
psiu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
116751270 (DNMT1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
116751270 (DNMT1)
DNA replication proteins [BR:
psiu03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
116751270 (DNMT1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116751270 (DNMT1)
Prokaryotic defense system [BR:
psiu02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
116751270 (DNMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
DMAP_binding
zf-CXXC
HTH_12
Motif
Other DBs
NCBI-GeneID:
116751270
NCBI-ProteinID:
XP_032482844
Ensembl:
ENSPSNG00000019956
LinkDB
All DBs
Position
3:complement(7054846..7097709)
Genome browser
AA seq
1654 aa
AA seq
DB search
MVRAASARRPSPSVSARKARAACAAAASAAPSKMPARTAPARVPALASRAFSLPDDVRRR
LKDLERDSLTEKECVKEKLNLLHEFLQTEIKNQLCDLETKLHKEELSEEGYLAKVKSLLN
KDLSLENGAHAFSREVNGCLENGSQTSGEEHRVEIAEKKKSPKPVSKLCMPRRSKSDAET
KSAEVSSSPRITRQTTRQTTITSHFTRGPAKRKPEEDAEKAKSDDSVDEEEKDQEEKRRR
VTSRERVAGPLPAEEPGRLRPGTHVEEEERDDKVKPGHLQEEKRLRSQTKELTPKQKSKE
EPDRDARPGGAQAEMNEGEDKDEKRHRSQPKDLASKRRPEEKEPERVKPQISEEKDEDEK
EEKRRRTTCKEPSEKKMARTKMAVVSSKTDPLKCIECGQYLDDPELRYEQHLPDAVEEIQ
LLTNERLSIFDANESGFESYEDFPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSA
KPIYEDDPSPEGGVNGKNLGPINEWWIAGFDGGEKALLGFSTSFAEYILMDPSPEYAPLF
SVMQEKIYISKIVVEFLQNNPDSTYEDLINKIETTVPPSMLNLNRFTEDSLLRHAQFVVE
QVESYDRAGDSDEQPIFLTPCMRDLIKLAGVTLGKRRAERRQTIRHPAKEKDRGPTKATT
TKLVYQIFDTFFAEQIEKDDKEDKENAFKRRRCGVCEICQQPECGKCKACKDMVKFGGSG
RSKQACQKRRCPNMAMKEADDDEEVDDNIPEMPSPKKMHQGKKKKQNKDRIFWVGEAVKT
DGKKSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAG
TDTVLGATSDPLELFLVDECEDMQLSYIHSKVQVVYKAPSENWALEGGVDPEALMSEDDG
KTYFYQLWYDQDYARFESPPKTQPMEDNKYKFCASCARLAEMRQKEIPRVMEQLEDLDGR
VLYSLATKNGIQYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEALYPEHYRKYSDYI
KGSNLDAPEPYRIGRIKEIFCSKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADIN
LLYWSDEEAVVDFKAVQGRCTVEYGEDLPECLQDFSAGGPDRFYFLEAYNAKSKSFEDPP
NHARSPGNKGKGKGKGKSRTKSQSSEPSELETEIKLPKLRTLDVFSGCGGLSEGFHQAGI
SETLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLVMAGEVTNSRGQKLPQKGDVEML
CGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVL
KLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEQLPLFPEPLHVFAPRACQ
LSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEIRNGASAQEISYNGEPQSWFQRQL
RGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYH
DKKNGCSSAGALRGVCSCVEGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDG
FFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVP
PPLAKAIGLEIKRCMMVRARESTSVKIKEETAKD
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggtacgcgctgcctccgctcgccgcccctccccatcggtttccgcgcgaaaagccagg
gctgcctgtgctgccgccgcctctgctgcaccttccaagatgcctgcccgtaccgcccca
gcccgggtgcccgcgctggcctcccgggccttctcactgcccgacgatgtccgcaggcgg
ctcaaagatttggaaagagatagtttaacagaaaaggaatgcgtgaaggagaaattgaat
ctcttgcatgaatttctgcagacagaaataaagaatcaattatgtgacttggaaaccaaa
ttacataaagaagaattatcagaggagggctacctggctaaagtcaaatcccttttaaat
aaagatttgtccttggagaacggagctcatgctttcagtcgggaagtgaatggatgtcta
gaaaacgggagccagacaagtggtgaggagcacagagtggaaatagcagagaaaaagaag
tcccccaaacctgtttccaaactttgcatgcccaggagaagcaagtccgatgcagaaaca
aaatcagctgaagtctcatctagccccaggattacaaggcaaactaccaggcagaccacc
atcacatctcatttcacaaggggccctgccaaacggaaacctgaggaagacgctgaaaaa
gcaaaatcagatgattctgtcgacgaagaagaaaaagaccaggaggaaaagagacgtaga
gttacatccagagaacgagttgctggaccgctccctgcagaagaaccgggaagactaaga
ccaggaacacacgtggaagaagaagaaagagatgataaagtaaagcctggtcacctccag
gaagaaaagagactcagaagtcaaaccaaagaactaacacctaaacagaaatctaaggag
gagccagacagagatgcgaggcccggaggagctcaggctgaaatgaatgaaggagaagac
aaagatgaaaagaggcacagaagtcaacccaaagatctagctagcaaacggagaccagaa
gaaaaagaacctgaaagagtaaaaccacagatttctgaagagaaagatgaggatgaaaag
gaggagaagagacgcagaactacatgcaaagaaccaagtgagaagaaaatggctcgaacc
aaaatggcagtagtgtcctccaagaccgatcctctgaagtgcattgagtgcggacagtac
ctggatgaccccgagctaagatatgaacagcatctccctgatgcagtggaagagatacag
ttgttgacaaatgagagactgtccatctttgatgccaatgaatctggctttgagagttac
gaggattttccccaacacaaactgacctgcttcagcgtgtactgtaaacgaggtcacctg
tgcccgatcgacaccggcctcattgagaaggatgtcgagctcctcttttctggttcagca
aagccaatatatgaggatgacccgtctcccgaaggtggtgttaatggcaaaaatcttggt
ccaataaatgaatggtggattgctggctttgatggaggtgaaaaggctctccttggcttt
agcacctcatttgccgaatacattttgatggatcccagcccagagtatgcaccactgttc
agtgtgatgcaagagaagatctacataagtaagatagtagttgagttcctgcagaacaac
cctgactcaacatacgaagacctgatcaataagattgagaccactgttcctccttctatg
ctcaacctgaatcgattcacagaggattctctccttcgacacgcccagtttgtggtggaa
caagtagagagttatgatcgggctggggacagtgacgagcagcccatcttcctgaccccc
tgcatgagagacctgatcaagttggccggggtcaccttgggaaaaaggcgagctgaaagg
cggcagaccatccggcatcctgccaaggagaaggacagaggccccaccaaagccaccact
acgaagctggtctaccagatctttgacactttctttgcggagcaaattgaaaaggatgac
aaagaagacaaggagaacgcctttaaacgccggcggtgtggcgtctgtgagatttgtcaa
cagcctgagtgtggaaagtgtaaagcctgtaaggatatggttaaatttggtggcagcgga
aggagcaaacaggcttgccaaaagaggaggtgtcccaacatggccatgaaggaggcagat
gatgatgaagaagtggatgacaatattccagagatgccatcacccaaaaagatgcatcag
gggaagaaaaagaagcagaacaaggatcggatcttttgggttggagaagctgtcaagacc
gatgggaagaagagttactataagaaggtatgcatcgactcggaaaccctggaagtgggg
gactgtgtttctgttattccagatgattcttcaaaaccactgtatttagcaagggtcacg
gcgctgtgggaggacagcagcaacgggcagatgtttcatgcccactggttctgtgctggg
acggacacggtcctcggggccacgtcggaccccctggagctgttcctggtagacgaatgt
gaggacatgcagctttcatacattcacagcaaagtgcaggtcgtttataaagccccgtcg
gaaaactgggccttggagggaggcgtggaccctgaggccctgatgtcggaggatgacgga
aagacctatttctaccagctttggtatgaccaagactacgcaagatttgagtcccctcca
aaaactcagccaatggaggacaacaagtacaagttctgtgcaagctgtgcacgtctggct
gaaatgaggcagaaggaaattcccagggtcatggagcagctcgaggacctggatggacgg
gtcctctacagcttagccaccaagaacggcatccagtatcgagtgggcgatggcgtgtac
ctcccccccgaggccttcaccttcaacattaagctgtccagtcctgtgaaacgcccacgg
aaggagcctgtggatgaagctctgtatccagaacactaccggaaatactctgactacatc
aaaggcagcaacctagatgcccctgagccgtaccgtattggccgcatcaaagagatcttc
tgcagcaagaagagcaacggcaggcccaacgagactgatatcaagatcagagtcaacaag
ttttacaggccggagaacacgcacaagtccaccccggcgagttaccacgcagacatcaac
ctgctttattggagtgacgaggaggctgtggtggacttcaaggccgtgcagggccgctgc
accgtggagtacggggaggacctgcctgagtgcctccaggacttctccgctggtggcccc
gaccgcttctacttccttgaggcctataatgccaagagcaaaagctttgaagatcctcca
aaccatgcccgtagccctggaaataaagggaaagggaagggaaaagggaaaagcaggaca
aagtcgcaaagctctgagccgagcgaactggagacggaaatcaagctgccgaagctgcgg
accctggatgtgttttctggctgtgggggtttgtcggaagggttccaccaagcaggcatc
tcggaaacgctgtgggccatcgagatgtgggaccccgcggcccaggcgttccggctgaac
aatcccgggtccacggtgttcacagaggactgcaacgtcctgctgaagctggtcatggcc
ggggaggtgaccaactcccgcggccagaagctgccgcagaagggagacgtggagatgctg
tgtggcgggcctccttgccaaggctttagcggcatgaaccgcttcaactctagaacctac
tctaagttcaagaactccctggtggtctccttcctcagctactgcgactactaccggccc
aggtacttcctcctggagaatgtcaggaacttcgtctccttcaagcgctccatggtcctg
aagctcacgctccgctgcctggtccgcatgggctaccagtgcaccttcggcgtgttgcag
gctggtcagtacggcgtggcccagacgcggaggcgggccatcatcctggccgcggccccc
ggagagcagctccctctgttcccggagccgctgcacgtgttcgcgccccgggcctgccag
ctgagtgtcgtagtcgacgacaagaagtttgtcagcaacatcaccaggttgagctcgggt
ccgttccgaaccatcaccgtgcgggacacgatgtccgaccttcctgagattcggaacgga
gcttcagcgcaggagatctcgtacaacggggagcctcagtcctggttccagaggcagctc
cggggctcgcagtaccagcccatcctcagggaccacatctgtaaggacatgagcgcgttg
gtggctgctcgcatgcggcacatccctctagccccgggctcagactggcgtgacctgcca
aacatcgaggtgcggctctctgatggcaccttggccaggaagctgcggtacaactaccac
gacaagaagaatggctgcagcagtgccggggctctccgcggggtctgctcctgcgtggaa
ggcaaagcctgtgaccctgcggccagacagttcaacactctcattccctggtgcctgccc
cacaccgggaacaggcacaaccactgggccggcctctacggacggctcgagtgggacggc
ttcttcagcacgaccgtcaccaaccccgagcccatgggcaagcagggccgcgtgctccac
ccagagcagcaccgcgtcgtgagtgtgcgggagtgcgcccgctctcagggcttccccgac
acctaccggctgttcggcaacatcctggacaagcaccggcaggtgggtaacgccgtgcca
ccgccactggccaaagccatcggcttggagatcaagcgctgtatgatggtcagagcgcga
gagagcacctcagttaaaatcaaggaggagactgctaaggactag
DBGET
integrated database retrieval system
