Phocoena sinus (vaquita): 116751345
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Entry
116751345 CDS
T07759
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04082
Neuroactive ligand signaling
psiu04723
Retrograde endocannabinoid signaling
psiu04727
GABAergic synapse
psiu04742
Taste transduction
psiu05032
Morphine addiction
psiu05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116751345 (GABRA1)
04082 Neuroactive ligand signaling
116751345 (GABRA1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
116751345 (GABRA1)
04723 Retrograde endocannabinoid signaling
116751345 (GABRA1)
09157 Sensory system
04742 Taste transduction
116751345 (GABRA1)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
116751345 (GABRA1)
05033 Nicotine addiction
116751345 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116751345 (GABRA1)
Ion channels [BR:
psiu04040
]
Ligand-gated channels
GABA-A
116751345 (GABRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116751345
NCBI-ProteinID:
XP_032483018
Ensembl:
ENSPSNG00000012145
LinkDB
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Position
3:complement(34440215..34501237)
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AA seq
550 aa
AA seq
DB search
MHAVVKYLIKAADWILGSKFGCEIFSKGARRVHDGSDRSERVSERQSEDAPALPARRDSR
ARAGSQLSTIFSRRLFSGLERSSAQRGPELHKPAMKKSPGLSDYIWGWTLLLSTLTGRSY
GQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDME
YTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLL
RITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSV
VVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVI
LSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFS
ALIEFATVNYFTKRGYAWDGKSVVPEKPKKMKDPLIKKNNTYAPTATSYTPNLARGDPGL
ATIAKSATIEPKEVKTETKPPEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNRE
PQLKAPTPHQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcagtggttaaatatttgatcaaagctgcagattggatactgggaagcaaattt
gggtgtgaaatcttcagcaaaggagcacgcagagtccatgatggctctgaccgctcagag
cgagtgagtgagcggcagagcgaggacgcccctgcgctgccggcgcgccgggactcgcgg
gctcgcgctggctcccagctctccacgattttctctcgcagacttttctcgggtcttgag
cgatcctctgcccagagggggcccgagctgcacaagcccgcaatgaagaaaagtccgggt
ctctctgactacatttggggctggaccctccttctgagcacattgactggaagaagctat
ggacaaccctcattacaagatgaacttaaagacaacaccactgtcttcactaggattttg
gaccgactcctagatggttatgacaatcgcctgagaccaggattgggagagcgtgtaact
gaagtgaagactgacatcttcgtcaccagtttcggacccgtttcagaccatgatatggaa
tatacaatagatgtattcttccgtcaaagctggaaggatgaaaggttaaaatttaaagga
cccatgacggtactccggttaaataacctaatggcaagtaaaatctggactccggatacc
tttttccacaatggaaagaaatcagtggcacacaacatgaccatgcccaacaagctccta
cggatcacagaggatgggaccttgttgtacaccatgaggctgacggtgagagctgaatgt
ccaatgcatttggaggatttccctatggatgcccatgcctgcccactaaaatttgggagc
tatgcttacacgagagcggaagttgtttatgagtggaccagagagccggcacgctcagtg
gttgtagcagaagatgggtcacgcctaaaccagtacgatcttcttggacaaacagtagac
tctggaattgttcagtctagcacaggagaatatgttgttatgaccactcatttccacctg
aagagaaagattggctattttgttattcaaacatacctgccatgcataatgacggttatt
ctctcccaagtctcgttctggctcaacagagagtctgtaccagcaaggactgtctttgga
gtaacaactgtgctcaccatgacaactttgagtatcagtgccagaaattccctccctaag
gtggcttatgcaactgctatggattggtttattgctgtgtgctatgcctttgtattctca
gctctaattgagtttgccacagtaaactatttcaccaaaagaggttatgcatgggatggc
aaaagtgtggttccagaaaagccaaagaaaatgaaggatcctctcattaagaaaaacaac
acttatgctccaacagcaaccagctacacacctaatttggccaggggtgaccccggctta
gccaccattgctaaaagtgcaaccatagaaccaaaagaagtcaagacggaaacaaaacca
ccagaaccgaagaaaacctttaacagtgtaagcaaaattgaccgactgtcaagaatagcc
ttcccgctgttattcggaatctttaacttggtctattgggctacatatttaaacagagag
cctcagctaaaagcccctaccccacatcaatag
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