Phocoena sinus (vaquita): 116751373
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Entry
116751373 CDS
T07759
Symbol
BABAM1
Name
(RefSeq) BRISC and BRCA1-A complex member 1 isoform X1
KO
K20776
BRISC and BRCA1-A complex member 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116751373 (BABAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116751373 (BABAM1)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116751373 (BABAM1)
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116751373 (BABAM1)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
116751373 (BABAM1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
116751373 (BABAM1)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
116751373 (BABAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
Motif
Other DBs
NCBI-GeneID:
116751373
NCBI-ProteinID:
XP_032483058
Ensembl:
ENSPSNG00000000844
UniProt:
A0A8C9B3I3
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All DBs
Position
3:complement(12557877..12566068)
Genome browser
AA seq
330 aa
AA seq
DB search
MEVAEPSSPAEEEEEEEEEQSAEPRPRTRSNPEGAEDRALGAQANVGSRSEGEGEAASAD
DGTANPPGAGPKPWQVPPPAPEVQVRTPRVNCPEKVIICLDLSEEMSLPKLESLNSSKTN
ALNVSQKMIEMFVRTKHKIDKSHEFALVVVNDDTAWLSGLTSDPRELCSCLYDLETASCS
TFNLEGLFSLIQQKTELPVTENVQTIPPPYVVRTILVYSRPPCQPQFSLTEPMKKMFQCP
YFFFDVVYIHNGADEKEEEMSWKDMFAFMGSLDTKGTSYKYEVALAGPALELHNCMAKLL
AHPLQRPCQSHASYSLLEEDDEAAEAEATV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggcggagcccagcagtcccgctgaagaggaggaggaggaggaagaggagcag
tcagctgagcccagaccccgcactcgctccaaccctgagggggcggaggaccgggcgctg
ggggcccaggccaatgtgggcagccgcagcgagggcgagggtgaggcggccagtgctgac
gacgggaccgccaaccctcccggagccggtcccaagccgtggcaggtgcctccaccagcc
ccagaggtccaggtgcggacgccaagggtcaactgtccagagaaagtgatcatctgcctg
gacctgtcggaggaaatgtcgctgccaaagctagagtcattaaatagctccaaaaccaat
gccctcaacgtctcccagaaaatgatcgagatgttcgtgcggacaaaacacaagattgac
aagagccacgagttcgcgctggtggtggtgaacgatgacactgcctggctgtccggcctg
acctctgatccccgagaactctgcagctgcctctacgacctggagacggcctcctgctcc
accttcaatttggaaggtctcttcagcctcatccaacagaagaccgagctgccagtcaca
gagaatgtgcagacgattccaccgccgtacgtggtccgaaccatcctggtctatagtcgt
ccaccctgccagccccagttctccctgacggagcccatgaagaaaatgttccagtgcccg
tatttcttctttgatgttgtttacatccacaacggcgccgacgagaaggaggaggagatg
agttggaaggacatgtttgccttcatgggaagcctggataccaagggtaccagctataag
tatgaggtggcgctggctgggccagcccttgagctgcacaattgtatggccaagcttctg
gctcacccgctgcagcggccctgccaaagccacgcctcctacagcctgctggaggaggac
gatgaagccgccgaggctgaggccactgtctga
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