Phocoena sinus (vaquita): 116751396
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Entry
116751396 CDS
T07759
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04082
Neuroactive ligand signaling
psiu04723
Retrograde endocannabinoid signaling
psiu04727
GABAergic synapse
psiu04742
Taste transduction
psiu05032
Morphine addiction
psiu05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116751396 (GABRA6)
04082 Neuroactive ligand signaling
116751396 (GABRA6)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
116751396 (GABRA6)
04723 Retrograde endocannabinoid signaling
116751396 (GABRA6)
09157 Sensory system
04742 Taste transduction
116751396 (GABRA6)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
116751396 (GABRA6)
05033 Nicotine addiction
116751396 (GABRA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116751396 (GABRA6)
Ion channels [BR:
psiu04040
]
Ligand-gated channels
GABA-A
116751396 (GABRA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Foie-gras_1
DUF4396
Motif
Other DBs
NCBI-GeneID:
116751396
NCBI-ProteinID:
XP_032483112
Ensembl:
ENSPSNG00000012336
UniProt:
A0A8C9E4F1
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Position
3:complement(34648865..34664851)
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AA seq
453 aa
AA seq
DB search
MASPLPWLYIILWVENALGKLEDEGNFYSRNISRILDNLLEGYDNRLRPGFGGAVTEVKT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPAEILSLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKM
GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQKAKRKAQIAASPPVTIAKATEPLEAEI
VLHPDSKYHLKKRITSLTLPIVPSSKASTVLTRAPILQSTPVTPSPLSPTFAGTSKIDQY
SRILFPVAFAGFNLVYWIVYLSKDTMEVSSSVE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcctctgccctggctctacattattctatgggtagaaaatgccctagggaaa
ctggaagatgaaggaaacttctactccagaaacatcagtcggatcctggacaacttgctt
gaaggctatgacaatcggctgcgaccgggatttggaggtgctgtcactgaagtcaaaaca
gacatttatgtaacaagttttgggcccgtgtcagatgtggagatggagtatacaatggac
gttttcttccgccagacttggactgatgagaggttgaagtttggggggccagctgagatt
ctgagtttgaataacctgatggtcagtaaaatctggacgcctgacacttttttcaggaat
ggcaaaaaatcaattgctcacaatatgacaactcctaacaaactcttcagaataatgcag
aatggaacaattctatacaccatgaggcttaccatcaacgctgactgtcctatgaggctg
gttaactttcctatggatgggcatgcttgtccactcaagtttgggagttatgcttacccc
aaaagtgaaatcatatatacatggaaaaaaggaccactttactcagtggaagtcccagaa
gaatcttcaagcctccttcagtatgatctgattggacaaacagtatctagtgagacaatt
aaatctaacacaggtgaatacgtaataatgacagtttatttccacttgcaaaggaagatg
ggctattttatgatacagatctatactccttgcattatgacggtcattctttcccaggtg
tctttctggattaataaggagtctgttccggccagaactgtctttgggatcaccactgtc
ttaaccatgaccactctaagcatcagtgccaggcactccttgccaaaagtgtcttatgcg
accgccatggattggtttatagctgtttgctttgcttttgtcttctctgctcttattgag
ttcgcagctgtcaactactttaccaatcttcagacacagaaggccaaaaggaaggcacag
attgcagcctcacccccggtgacaatagcaaaagcgactgaacccttggaagctgagatt
gttttgcatcctgattccaagtaccatctgaagaaaagaatcacctctctgacattgcca
atagttccatcctccaaggccagcacagtcctcacaagagctcccatcttacagtcaaca
cctgtcaccccctcacccctctctcctacctttgcgggtaccagtaaaatagaccagtat
tctcggattctcttcccagttgcatttgcaggattcaaccttgtatactggatagtttat
ctttccaaagacacgatggaagtgagcagcagtgttgaatag
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