Phocoena sinus (vaquita): 116751404
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Entry
116751404 CDS
T07759
Symbol
CLCA4
Name
(RefSeq) calcium-activated chloride channel regulator 4
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04924
Renin secretion
psiu04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09152 Endocrine system
04924 Renin secretion
116751404 (CLCA4)
09154 Digestive system
04972 Pancreatic secretion
116751404 (CLCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116751404 (CLCA4)
Ion channels [BR:
psiu04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
116751404 (CLCA4)
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Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
DAG1
GBD_IRG7_N
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
116751404
NCBI-ProteinID:
XP_032483134
Ensembl:
ENSPSNG00000011942
LinkDB
All DBs
Position
1:77013537..77039984
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AA seq
933 aa
AA seq
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MGLFRSFVFLLALYLLQGSNTSLVRLDNNGYEGIIIAIDPAVPEDETLIQQIKDMVTSAS
TYLFEATKKRFFFKNVSILIPENWKNITQYKRPKHESYKHADVLVSPPTIPGRDEPYTKQ
FTACEGKGEYIHFTPDFVLGKKQNEFGPSGRLFVHEWAHHRWGVFDEYNDDEPFYSAKSK
KIEATRCSTGITGINRVYKCQGNSCVTKRCKTDSKTKLYEKDCQFFPDKYQTEKTSIMFM
QGIDSVAEFCNNKTHNREAPSLQNKMCDFRSTWEVISNSEDFRNTVVMVAPPPPPVFSLL
KISERIVCLVLDKSGSMDSSNRLNRMNQAARHFLLQTIENGSWVGMVHFDDRAYIKSNLI
QIISSNERRQLLNSLPTVASGGTSICSGIRSGFQVIRKKYSQIDGSEIVLLTDGEDSSAN
TCIDEVKQSGAIIHFIALGPNADKAVIKMSNVTGGGHFSATDEAQNNGLIDAFAALVSGN
TDASQQSLQLESKGLKLNSTDWMNGTVIIDSTVGKDTFFLITWNRQLPVISLLDPTGNSV
GNFTVDQPSKTAYLSIPGTTKVGVWTYSLQANAKEETLTITVNSRAANSSVPPITVNAKM
NKDTNSFPSPMIVYAEILQGYIPILGANVTAFIESNTGKTEVLELLDNGAGADSFKNDGV
YSRYFTTYKENGRYSLKVRAHGGENAVMRNLWHPLNRAAYIPGWVVDGNIKGNPPRPEID
ENTQTNVESFTRIASGGAFVVSDVPNLPSSIDLFPPSQITDLKATSDEDGISLTWTAPGD
DFDVGKVRKYIIRISGSVLDLRDNFDDALQVNTTYLLPNEANSKETFTFKPGNISEENAT
HIFIAIQSVDKSNLTSRVSNIAQVALFVPQPDDIPDEIHPDPTPDKNPPKSGLSISTLVV
FVVGTVIIVSLILSITICVLSRKRNSSRPRTGF
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggggttattcagaagttttgtcttcctcttggccctatacctgctgcaggggtccaat
acttcccttgttcggctggataacaatggctacgagggcattatcattgctatagaccct
gctgtgccagaagatgaaacactaattcaacagataaaggacatggtgacttcagcatct
acttatctgtttgaagccacaaaaaaaagattttttttcaaaaatgtatcaatattaatt
ccagagaattggaagaacatcactcagtacaagaggccaaagcatgaaagttacaaacat
gctgatgttttagtctcaccacctaccatcccaggtagagatgaaccatataccaagcag
ttcacagcctgtgaaggaaaaggagaatacattcacttcacccctgactttgtacttgga
aaaaaacaaaatgaatttggaccatcaggtagactgtttgtccatgagtgggcccatcac
cgctggggagtgtttgatgagtacaatgatgatgagcctttctacagcgctaagtcaaag
aaaattgaagcaacaaggtgttccacaggcattactggtataaacagagtgtataagtgt
caaggaaacagctgtgtaactaagagatgcaaaactgattccaagacaaaactgtatgaa
aaagattgtcagttcttccctgataaatatcaaactgaaaagacatccataatgtttatg
caaggtattgattctgtcgctgaattctgtaataacaaaacccataaccgtgaagctcca
agcctacaaaacaaaatgtgcgatttcagaagcacatgggaggtgatcagcaattctgag
gattttagaaacacagtggttatggtggcaccaccccctccgcctgtcttctcattgcta
aagatcagtgaaagaattgtgtgcttagtccttgataagtctggaagcatggatagttct
aatcgcctaaatcgaatgaatcaagcagcaagacatttcctgcttcagaccattgaaaat
ggatcctgggtggggatggtgcactttgacgatcgtgcctacatcaaaagtaatctaatc
caaataataagcagcaatgaaagaagacagctcttgaacagtttacctacagttgctagt
ggaggaacttccatctgcagtggaattagatcaggatttcaggtaattagaaagaaatac
tcccaaatagatggatctgaaatagtgctgctgactgatggggaggatagctctgcaaac
acctgtattgatgaagtgaaacaaagtggggccataattcactttattgctctgggacca
aatgccgataaagcagtcataaagatgagcaatgtaacaggaggaggacatttttctgct
acagatgaagcccagaacaatggcctcattgatgctttcgcggcccttgtatcaggaaac
accgatgcctcccagcaatctcttcagcttgaaagtaagggattaaaactcaacagtact
gactggatgaacggcactgtaataattgatagcactgtgggaaaggacacattctttctc
atcacatggaaccgacagcttcccgttatttctctcttggatcccactggaaactcagtg
ggaaatttcacagtggatcaaccttccaaaacggcctatctcagtattccaggaactaca
aaggtgggtgtttggacttacagtcttcaagcaaatgcaaaagaggagacattaactata
acagtaaattctcgagcggcaaattcttctgtgcctccaatcacagtgaatgctaaaatg
aataaagatacaaacagcttccccagcccaatgattgtttatgcagaaattctacaaggg
tatatacccattcttggagccaatgtgactgctttcattgaatcgaatactgggaaaaca
gaagttttggaacttttggataatggtgcaggtgctgattcttttaagaatgatggagtc
tactccagatattttacaacttataaagaaaatggcagatatagcttgaaagtacgggct
catggaggagaaaatgctgtcatgcgaaacttatggcatccactgaatagagctgcatat
ataccaggctgggtagtggatgggaacattaaagggaatccaccaagacctgaaattgat
gagaacactcagacaaacgtggagagtttcaccagaatagcatctggaggtgcatttgtg
gtttcagatgttccaaatcttccctcctcaattgacctcttcccaccaagtcaaatcaca
gaccttaaggccacatcagatgaggatgggatcagtctaacatggacagcaccaggagat
gattttgatgttggaaaagttcgaaagtatatcataagaataagtggaagtgtcctggat
ctaagggataattttgatgatgcgctgcaagtaaacactacttatctgttaccaaatgag
gccaactccaaggaaacctttacattcaaaccaggaaatatctcagaagaaaatgcaacc
cacatattcattgccattcaaagtgtggataaaagcaatttgacatcaagggtatctaac
attgcacaagtagctttgtttgttcctcaaccagacgacatacctgatgaaattcatcca
gatcctactcctgataaaaatccccctaagtccggactcagcatttctactttggtggtg
ttcgtggttggcactgtgataattgtcagtctgattttgagtatcaccatttgtgtctta
agcaggaaaagaaattctagcagacctagaacagggttttaa
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