Phocoena sinus (vaquita): 116751483
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Entry
116751483 CDS
T07759
Symbol
IRX1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116751483 (IRX1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116751483 (IRX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
MRP-S32
Astro_capsid_p
Motif
Other DBs
NCBI-GeneID:
116751483
NCBI-ProteinID:
XP_032483321
Ensembl:
ENSPSNG00000002005
UniProt:
A0A8C9B938
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Position
3:complement(171592049..171597594)
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AA seq
476 aa
AA seq
DB search
MSFPQLGYPQYLSAAGPGAYGGERPGVLAAAAAAAAAASSGRPGAAELGAGAGAAAVTSV
LGMYAAAGPYAGAPNYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHTAPAYYPY
GQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKVTWGARSKDQEDGTLFGSDTEGDPEKAEDDEEIDLESIDIDKIDEHDGDQ
SNEDDEDKAEAPRAPAAPAALARDQGSPLAAADTFKPQDSPLGLAKEVPEPGSTRLLSPG
AAAGGLQGAPHSKPKIWSLAETATSPDGAPKASPPPAGHAGTHGPPAGAPLQHPAFLPSH
GLYTCHIGKFSNWTNGAFLTQGSLLNVRSFLGVGAPHGPHLSAPPPPPQPPVTVAAGVLH
GDKASSRSSPSLPERDLIPRPDSPAQQLKSPFQPVRDNSLAPQEGTPRILAALPSA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggctacccgcagtacctgagcgccgcggggcccggcgcctac
ggcggcgagcgcccgggagtgctggccgcggctgccgcggcggccgccgccgcctcgtcg
ggccggcccggggcggcggagctgggcgcgggcgcgggtgcggccgccgtcacctcggtg
ctgggcatgtacgcggcggccggcccgtacgcgggcgcgcccaactacagcgccttcctg
ccctacgccgcggacctcagcctcttctcgcagatgggttcacagtatgagctcaaggac
aaccccggggtgcaccccgccaccttcgccgcccacacggcgccggcctattacccctac
gggcagttccagtacggggatcccgggcggcccaagaacgccacgcgagagagtaccagt
accctcaaggcctggctcaacgagcaccgcaagaacccctaccccaccaagggcgagaag
atcatgctggccatcatcaccaagatgaccctcacgcaggtctccacctggttcgccaac
gcgcgccggcgcctcaagaaggagaacaaggtgacgtggggcgcgcgcagcaaggaccag
gaggacggcactctcttcggaagcgataccgagggggaccctgagaaggccgaggacgac
gaggagatcgacctggagagcatcgacatcgacaagatcgacgagcacgacggcgaccag
agcaacgaggatgacgaggacaaagccgaggcgccgcgcgcgcccgccgcgcctgccgcc
ctcgcccgggaccagggctcgccgctggcggccgccgacacgttcaagccccaagactcc
cccctgggcctggccaaggaggtcccggagcccggcagcacgcgcctgctgagtccgggc
gccgcggcgggcggcctgcagggcgcgccgcacagcaagcccaagatctggtcgctggcc
gagacggccaccagccccgacggcgcgcccaaggcctcgccgcctcccgccggccatgcg
ggcacgcacgggccccccgcgggcgcgccgctgcaacacccggccttcctgcccagccac
ggactgtacacctgccacatcggcaagttctccaactggaccaacggcgcgttcctcacg
cagggctcgctgctcaacgtgcgctccttcctgggcgttggcgcgccccacggcccgcac
ctgtccgcgccgccgccgccgccgcagccacccgtcaccgtggccgcgggggtgctccac
ggcgacaaggcctcgtcccgcagcagcccctcgctcccagagagagacctcatccccagg
ccggactcgccggcacagcagttaaagtcgcccttccagcccgtgcgcgacaactcgctg
gccccgcaggaggggacgccgaggatcctagcagccctcccatcagcctga
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