Phocoena sinus (vaquita): 116751484
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Entry
116751484 CDS
T07759
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116751484 (SOX30)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116751484 (SOX30)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
116751484
NCBI-ProteinID:
XP_032483322
Ensembl:
ENSPSNG00000009931
LinkDB
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Position
3:38676435..38709533
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AA seq
767 aa
AA seq
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MERARPEPPPQPRQLPRATPPRPLRPAPPPVAVEGASFRAAAAEPSASPLAACAAAIVTV
ASSCGEAPASGVQPAARRVLQVNPEQVLLLPPGPPLPQGREEGAAASPVQARLLQLRPEL
LLLPPPASEGSPCRPQLHPVQPLPVHVKTEKQELDPSLDPSVGPRRAVKAGLKASKAAKA
GGPGPALDSPRGDEKGKLEEEEDVMSYTAAKGGEGKSLAAIREGVIKTEEPERLREDSRL
GTEPASSDLVHGSKDVILTQPSIAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELTGL
TKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMV
WARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWIY
QPRPGKRKRFPLSVSNVLSGTTQNIISTNSTTVYPYCSPTYSVVIPSLQNPITHSVDEAP
PAIQLPTPAVQRPSPITVFQPSISSTAQVAVQAPSLPLCPPLLPQCFAGPSETDTHQLHS
GASHSVKRPTPVFLESTSRIPTSASTAHARFAASTIQPPKEYPSISTCPRSVPIPQAPPI
PHSHIFQPPPLGHAATLFGTPPRFAFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSAVP
ECLGYYEDRCQNHEAMFSALNRDYPYGDYPDERAHSEDFWSCESMDGTSYCNSHSHSGEE
YLNLVPQLDTGALESVFTAPTTTPSNIQQVNVTDSDDEEEEKVLKNL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgccgcctcagccgcgccaactgccgcgggcgaccccg
ccgcgcccgctgcgccccgctccgcccccggtggctgtcgagggcgcctcctttcgggca
gcggccgcggagccctctgcgtcgccgctcgccgcgtgcgcggccgccattgtgacggta
gcctcgtcgtgcggagaggctccggcgtcgggcgtacagcccgcggcacggcgggtactg
caggtgaacccggagcaggtgttactgctgccgccggggccaccactgcctcagggccgg
gaggaaggcgcagccgcctctcccgtgcaggcgcggctgctgcagctgaggcccgagctg
ctactgctgccgccgccggcgtccgagggctccccctgcaggcctcagttgcacccggtg
cagcccctgccggtgcacgttaagacagagaagcaggagctggaccccagcttggatccg
tcagtgggacctcggagggccgtcaaggcgggccttaaggcctccaaggcagcgaaggca
ggaggccccgggccggccctcgacagcccccgaggggacgagaagggcaagctggaggaa
gaggaggatgtcatgagctacacggcggcgaaaggcggggaaggcaaaagcctggcggct
atcagagaaggagtcatcaaaacggaggagcctgagagactccgcgaggactccaggctc
ggcacagagcccgcgtccagtgacctggtccatggcagcaaggatgtcatcctgacccag
ccgtccattgcctttgggccgcaccagcaagacctcaggatccctttgactcttcatacc
gtgccccctggagcccggatacagtttcagggacctccaccttcagagctgacaggattg
accaaggtccccttgacaccagtgcctattaaaatgcagtccttactggaaccttctgta
aaaattgaaaccaaagatgtcccgctcaccgtgcttccctcagatgcaggaataccagac
actcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatggtt
tgggcaaggatccaccggccagcactagccaaagctaacccagcagccaacaatgcagaa
atcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaaaagaaaccctat
tatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttggatttat
cagcctcgtccagggaagcgaaaacgcttccctctaagcgtttccaatgtactttctggt
accacacagaatatcatctctacaaattcaacaacagtttatccttattgctcacctacc
tactctgtggtaattcccagcctacagaaccccatcactcattcagttgatgaagctcca
cctgccatccagctgcccacacctgcagtccagcgcccaagccccatcacagttttccag
ccaagcatctccagtactgcccaggtggctgtccaggctccaagtttgcccctttgtcca
ccactcctaccccagtgctttgctgggccctccgaaacggacactcatcagctgcattct
ggagccagtcactctgtgaagagacccactcctgtctttctggagagcaccagcaggatt
ccaactagtgcaagtactgcccacgccagatttgcagcctctaccatccagcctcccaag
gagtatcccagcatttccacttgtcccagaagtgttccaatcccccaagctcctcctatt
ccacactcacatatcttccagccccctccccttggccatgcagccacattatttgggacg
ccaccacgattcgcttttcatcacccttacttcctacctggacctcactacttcccatca
agcacgtgcccttatagtcggcctccttttggctatggaaattttccaagtgcagtgcca
gaatgccttggttattatgaagacagatgccagaaccatgaggctatgttttcagcttta
aatagagactatccttatggagactacccagatgaacgtgctcacagtgaagatttttgg
agttgtgagagcatggatgggacctcttactgtaacagtcatagccacagtggggaggaa
tacttaaatctcgtgcctcagctggacactggagccttggaaagtgtcttcacagccccg
acaacaactccctctaacatccagcaagtcaatgtcactgacagtgatgatgaggaagaa
gaaaaagtgctcaagaatttataa
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