KEGG   Phocoena sinus (vaquita): 116751524
Entry
116751524         CDS       T07759                                 
Symbol
XRCC4
Name
(RefSeq) DNA repair protein XRCC4
  KO
K10886  DNA-repair protein XRCC4
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    116751524 (XRCC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116751524 (XRCC4)
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     116751524 (XRCC4)
SSDB
Motif
Pfam: XRCC4_CC XRCC4_C XRCC4 XLF CMAS
Other DBs
NCBI-GeneID: 116751524
NCBI-ProteinID: XP_032483428
Ensembl: ENSPSNG00000003042
UniProt: A0A8C9B2U0
LinkDB
Position
3:complement(106916636..107172846)
AA seq 333 aa
MERKVNRIYLASEPDIIHFLQVAWEKTLGSGFVITLTDGQSAWTGTVCESEISQEADDMA
MEREKYVDELRKALVSGAGPTDTYKFNFSKESCHFSFEKNLKDVSFRLGSFNLEKVANPA
EVIRELICRCLDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKCVSAKEALETDLYKRF
ILVLNEKKAKIRSLNKLLNEVQELEKNIEHKRETPTCSEMTTDRDAIYDESTDEESEIPP
NPSVLSPATVRRDDSIISSPDVTDIAPTRKKRQRMQKNLGTEPKMASQEHRLQEKEKLDP
PQPEMLKKDHSPAENMSLETLRNSSPGDLFDEI
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggagagaaaagtaaacagaatctatcttgcttctgaacctgatataattcattttcta
caagttgcttgggaaaaaacactaggatctggttttgttattacacttactgatgggcag
tcagcatggactgggacagtttgtgaatcagagatttcccaagaagctgatgacatggca
atggaaagagagaaatatgttgatgaactgagaaaagcactggtgtcaggagcaggacca
actgacacatacaagttcaatttttcgaaagagtcttgtcacttctcctttgagaaaaac
ttgaaagatgtttcattcagacttggttccttcaacctagagaaagttgcaaacccagct
gaggtcattagagaacttatttgtcgttgcctggacaccattgcagaaaaccaagccaaa
aatgagcacctacagaaagaaaatgaaaggcttctgagagactggaatgatgtccaagga
cgatttgaaaaatgtgtgagtgctaaggaagctttggagactgatctttataaacggttc
attctggtgctgaatgagaagaaagcaaagatcagaagcttaaataaattgttaaatgaa
gtgcaggaactggaaaagaacatcgagcataaaagggaaactccaacatgttctgaaatg
actactgacagagatgcaatctatgatgaaagtactgatgaggaaagtgaaatcccacct
aatccctctgtgttaagtccagctactgtaagaagagatgattccattatttcaagtcct
gatgtcactgatattgcaccaactagaaagaagaggcagcggatgcaaaaaaatcttgga
acagagcctaaaatggcttctcaggagcatcggcttcaagaaaaggaaaagcttgatcct
ccacaacctgagatgctgaaaaaggatcacagcccagctgaaaacatgtctttagaaact
ctaagaaacagtagtccaggagacctctttgatgagatttaa

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