Phocoena sinus (vaquita): 116751565
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Entry
116751565 CDS
T07759
Symbol
SAMD1
Name
(RefSeq) atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116751565 (SAMD1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
116751565 (SAMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAMD1_SHD
SAM_1
SAM_PNT
SAM_2
Motif
Other DBs
NCBI-GeneID:
116751565
NCBI-ProteinID:
XP_032483522
Ensembl:
ENSPSNG00000002646
UniProt:
A0A8C9B1M1
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All DBs
Position
3:8820612..8824267
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AA seq
539 aa
AA seq
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MAGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGGPA
AAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAAATAPPSPGPAQPGPRAQRAAPLAA
PPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQQPPPQPQQPPEGGA
ARAGGPARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPR
GDRPGRAPSAASARASRSKRGGEERVLEKEEEDEDDEGEDDEDEVSEGSEVPEGDRPAGA
QHQQLNGERGPQSAKERIKEWTPCGPHQGQDEGRGPAPGSGTRQVFSMAAMNKEGGSASA
ATGPDSPSPVPLPPGKPALPGADGTPFGCPSGRKEKPADPVEWTVTDVVEYFTEAGFPEQ
ATAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEHHIKVLQQGHFEDDDPDGFLG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gctgcctcgtcgtccgccgcttccccgcactaccaagagtggatcctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgccgagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccggcgcggagccaccccgccggccccgccgcgcgccccccgcgggggccccgcc
gccgccgccgccgccgcgccgccgcccacgcccgccccgccgccaccgcccgcgcccgtc
gccgccgccgccccggcccgggcgccccgcgcggccgccgctgccgccgccacagcgccc
ccctcgcccggccccgcgcagccgggcccccgcgcgcagcgggccgcgcccctggccgcg
ccgccgcccgctcccgctgctcctccggcagtggcgcccccggccggcccgcgccgcgcc
cccccgcccgccgtcgccgcccgggagccgccgctgccgccgccgccacagccgccggcg
ccgccacagcagcagcagcagccgccgccgcagccacagcagccgccggaggggggcgcg
gcgcgggccggcggcccggcgcggcccgtgagcctgcgggaagtcgtgcgctacctcggg
ggcagcggcggcgccggcggccgcctaacccgcggccgcgtgcaggggctgctagaggag
gaggcggcggcgcggggccgcctggagcgcacccgcctcggagcgctcgcgctgccccgc
ggggacaggcccgggcgggcaccatcggctgccagcgcccgcgcgtcgcggagcaagaga
ggtggagaagagcgagtgcttgagaaggaagaggaggatgaagacgatgaaggtgaagat
gatgaagacgaagtgtctgagggctccgaggtgcccgagggtgaccgtcctgcaggtgcc
cagcaccagcagctcaatggcgagcggggccctcagagcgccaaggagaggatcaaggag
tggacaccctgtggaccccaccagggccaggatgaagggcgggggccagcaccaggcagt
ggtacccgacaggtgttctccatggccgccatgaataaggaagggggatcagcctccgct
gccactgggccagactccccatcccccgtgcctttgcccccaggaaaaccagccctacct
ggggctgacgggaccccctttggctgtccttctgggcgcaaggagaagccggctgatcct
gtggagtggacagtgacagatgtggtagagtacttcaccgaggccggcttccccgagcag
gcaacagctttccaagagcaggaaatcgatggcaagtccttgctgctcatgcaacgcaca
gatgtgctgaccggcctgtccatccgcctcggcccagccctgaaaatctacgagcaccac
atcaaggtgctgcaacaaggccactttgaggatgacgaccccgatggcttcctaggctga
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