KEGG   Phocoena sinus (vaquita): 116751565
Entry
116751565         CDS       T07759                                 
Symbol
SAMD1
Name
(RefSeq) atherin
  KO
K26266  sterile alpha motif domain-containing protein 1
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psiu03036]
    116751565 (SAMD1)
Chromosome and associated proteins [BR:psiu03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Other PRC associated proteins
     116751565 (SAMD1)
SSDB
Motif
Pfam: SAMD1_WH SAMD1_SHD SAM_1 SAM_PNT SAM_2
Other DBs
NCBI-GeneID: 116751565
NCBI-ProteinID: XP_032483522
Ensembl: ENSPSNG00000002646
UniProt: A0A8C9B1M1
LinkDB
Position
3:8820612..8824267
AA seq 539 aa
MAGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGGPA
AAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAAATAPPSPGPAQPGPRAQRAAPLAA
PPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQQPPPQPQQPPEGGA
ARAGGPARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPR
GDRPGRAPSAASARASRSKRGGEERVLEKEEEDEDDEGEDDEDEVSEGSEVPEGDRPAGA
QHQQLNGERGPQSAKERIKEWTPCGPHQGQDEGRGPAPGSGTRQVFSMAAMNKEGGSASA
ATGPDSPSPVPLPPGKPALPGADGTPFGCPSGRKEKPADPVEWTVTDVVEYFTEAGFPEQ
ATAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEHHIKVLQQGHFEDDDPDGFLG
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gctgcctcgtcgtccgccgcttccccgcactaccaagagtggatcctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgccgagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccggcgcggagccaccccgccggccccgccgcgcgccccccgcgggggccccgcc
gccgccgccgccgccgcgccgccgcccacgcccgccccgccgccaccgcccgcgcccgtc
gccgccgccgccccggcccgggcgccccgcgcggccgccgctgccgccgccacagcgccc
ccctcgcccggccccgcgcagccgggcccccgcgcgcagcgggccgcgcccctggccgcg
ccgccgcccgctcccgctgctcctccggcagtggcgcccccggccggcccgcgccgcgcc
cccccgcccgccgtcgccgcccgggagccgccgctgccgccgccgccacagccgccggcg
ccgccacagcagcagcagcagccgccgccgcagccacagcagccgccggaggggggcgcg
gcgcgggccggcggcccggcgcggcccgtgagcctgcgggaagtcgtgcgctacctcggg
ggcagcggcggcgccggcggccgcctaacccgcggccgcgtgcaggggctgctagaggag
gaggcggcggcgcggggccgcctggagcgcacccgcctcggagcgctcgcgctgccccgc
ggggacaggcccgggcgggcaccatcggctgccagcgcccgcgcgtcgcggagcaagaga
ggtggagaagagcgagtgcttgagaaggaagaggaggatgaagacgatgaaggtgaagat
gatgaagacgaagtgtctgagggctccgaggtgcccgagggtgaccgtcctgcaggtgcc
cagcaccagcagctcaatggcgagcggggccctcagagcgccaaggagaggatcaaggag
tggacaccctgtggaccccaccagggccaggatgaagggcgggggccagcaccaggcagt
ggtacccgacaggtgttctccatggccgccatgaataaggaagggggatcagcctccgct
gccactgggccagactccccatcccccgtgcctttgcccccaggaaaaccagccctacct
ggggctgacgggaccccctttggctgtccttctgggcgcaaggagaagccggctgatcct
gtggagtggacagtgacagatgtggtagagtacttcaccgaggccggcttccccgagcag
gcaacagctttccaagagcaggaaatcgatggcaagtccttgctgctcatgcaacgcaca
gatgtgctgaccggcctgtccatccgcctcggcccagccctgaaaatctacgagcaccac
atcaaggtgctgcaacaaggccactttgaggatgacgaccccgatggcttcctaggctga

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