Phocoena sinus (vaquita): 116751568
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Entry
116751568 CDS
T07759
Symbol
TRIM17
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM17
KO
K12007
tripartite motif-containing protein 17 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116751568 (TRIM17)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116751568 (TRIM17)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116751568 (TRIM17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4
PRY
zf-RING_6
ORC_WH_C
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
116751568
NCBI-ProteinID:
XP_032483528
Ensembl:
ENSPSNG00000003706
LinkDB
All DBs
Position
3:complement(15547687..15552866)
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AA seq
465 aa
AA seq
DB search
MDAVELARKLQEEATCSTCLDYLTDPAMTTCSHNFCRECIRLTWEKAKGQKTREKCKGSF
PCPECHKLSPQRNLRPNSLLTKVAEMARQHPSLQSRDLCQVHQELLELFCEDDQSPICVI
CRESREHRPHRVVPIEEAVQEYKLKLEENMGXLREEMMKTGKLQAKEEQTLAEWQKKVKE
WRERIVVEFEKMGLLQALKEEEEETVAKLHKSMASLDQQSHSLKMLLLQLEDRNECTPLQ
KLQDVKDLLGRKNSLSVQYPETSPTMLKTVCRVXGQIEVLKSFQEDMVPDPSTAYPYLLL
YESRQRRYLSTPMDGTPRGKDRFLAYPCAVGQETFSSGRHYWEVGMNLTGDALWVLGMCR
DNVSRRGRVPKCPENGFWVVQLCKGKRYVPAMSALTPVTLTEPPSHMGIFLDFEAGEVSF
YNVNNGSHPHTYSQPAFSGLLQPFFSLGAPKSGQMVISTVTLWVK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgtggaacttgccagaaaattgcaggaggaggccacttgctccacctgtctc
gactacctcacagaccccgcgatgaccacctgcagtcacaatttctgccgagagtgcatc
cggctgacctgggagaaggccaaaggccagaaaacgagggaaaagtgtaagggctccttt
ccctgccccgagtgccacaagctatccccccagaggaacctgcggcccaacagtctgctg
accaaggtggccgagatggcacggcagcaccccagcctacagagcagggacctgtgccag
gtgcaccaggagctgctcgaactcttttgtgaggacgaccagagtcccatctgcgtcatc
tgcagggagtcccgggaacaccggccccacagggtggtccctattgaggaggctgtgcag
gaatacaagttgaagttggaggagaacatgggatagctgcgagaggaaatgatgaagacc
gggaagttgcaagccaaggaggaacagaccttggccgaatggcagaagaaggtgaaggag
tggagggagcgcatcgtggttgagtttgagaagatgggcctcctccaggctctgaaggag
gaggaggaggagacagtggcaaagctgcataagagcatggcctcactggaccagcagagt
cactccttgaagatgctgctactgcagctggaggacaggaatgagtgcacaccgctccag
aagctgcaggatgtgaaggacctcctgggcaggaagaacagcctgagcgtgcagtaccca
gagaccagccccaccatgctgaagaccgtctgtagggtgnctgggcagatagaggtgctc
aagagtttccaagaggatatggtgcccgacccctccacggcatacccctacctcctctta
tatgagagccgccagaggcgctacctgagcaccccgatggatggcacaccccgtggcaag
gacaggttcctagcctacccctgcgcagtgggccaagagaccttctcctcagggaggcac
tactgggaggtgggcatgaacctcactggtgatgcactgtgggtcctgggcatgtgcagg
gacaacgtgagccggaggggcagggtccccaagtgcccagaaaatgggttctgggtggtg
cagctatgtaagggaaagaggtatgtacctgccatgtctgccctgacacccgtcacactg
actgagccccccagccacatgggcatcttcctggatttcgaggccggagaggtgtccttc
tacaatgtgaacaatgggtcccacccgcatacctactcccagcccgccttctctggcctc
ctgcaacccttcttcagccttggggcccccaaatcgggccagatggtcatctctacagtg
accctatgggtgaagtga
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