Phocoena sinus (vaquita): 116751627
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Entry
116751627 CDS
T07759
Symbol
CYFIP2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04810
Regulation of actin cytoskeleton
psiu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116751627 (CYFIP2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116751627 (CYFIP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116751627 (CYFIP2)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116751627 (CYFIP2)
Factors involved in mRNA localization
Other mRNA localization factors
116751627 (CYFIP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
116751627
NCBI-ProteinID:
XP_032483677
Ensembl:
ENSPSNG00000010541
UniProt:
A0A8C9BYY1
LinkDB
All DBs
Position
3:complement(38869780..39001775)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF
FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccacgtcaccctggaagatgccctgtccaacgtggacctgctggaagagctg
cccctccctgaccagcagccatgcatcgaacccccgccttcctccatcatgtaccaggct
aactttgacacaaacttcgaggacaggaatgcgtttgtcacaggcattgcaaggtacatt
gagcaggctacagtccactccagcatgaatgaaatgctggaggaagggcacgagtacgcg
gtcatgctatacacctggcgcagctgttcccgggccatcccccaggtgaagtgcaacgag
cagcccaaccgagtggagatctatgagaagaccgtggaggtgctggagccggaggtcact
aagctcatgaagttcatgtactttcagcgcaaggccatcgaacgcttctgcagtgaggtg
aaacggctgtgccacgctgagcgcaggaaagactttgtctccgaggcctacctcctgacc
ctgggcaagttcatcaacatgtttgcagtcttggacgagctgaagaatatgaagtgcagc
gtcaagaacgatcactctgcctacaagagggcggcgcagttcctgaggaagatggcggac
ccccagtctatccaggagtcacagaacctgtccatgttcctggccaatcacaacaggatc
acccagtgtctccaccagcaactggaagtgatcccaggctatgaggagctgctggccgac
attgtcaacatctgtgtggattactacgagaacaagatgtatctgacccccagtgagaag
cacatgctcctcaaggtcatgggttttggtctctacctgatggatggaaacgtcagtaac
atttacaaactggatgccaagaagaggatcaacctcagcaaaatcgataagttctttaag
cagctgcaggtggtgccccttttcggcgacatgcagatagagctggccagatacattaag
accagtgctcactatgaagagaacaagtccaagtggacgtgcacccagagcagcatcagc
ccccagtacaatatctgtgagcagatggttcagatccgggatgaccacatccgctttatc
tccgaactcgctcgctacagcaacagtgaggtggtgacgggctccgggctggacagccag
aagtcggacgaggagtaccgcgaactctttgacctggccctgcggggcctgcagctcttg
tccaagtggagcgcccacgtcatggaggtgtactcctggaagctcgttcaccccacggac
aagttctgcaacaaggactgcccgggcacggccgaggagtatgagcgagccacccgctac
aactacaccagtgaggagaagtttgccttcgtcgaggtgatcgccatgatcaaaggcctg
caggtgctcatgggcagaatggagagcgtcttcaaccaggccatcaggaacaccatctac
gcagccctgcaggactttgcccaggtgaccctgcgtgaacccctcaggcaggcagtgcgg
aagaagaagaatgtcctcatcagtgtcctacaggcaattcggaaaaccatctgtgactgg
gagggaggccgagagccccccaatgacccgtgcttgagaggggagaaggaccccaaaggt
ggatttgacatcaaggtgccccggcgtgccgtgggaccctccagcacacagctgtacatg
gtgcggaccatgcttgaatcgctcatcgcagacaaaagtggctccaagaagaccctgcgg
agcagcctggatggacccatcgtcctcgccatagaggacttccacaagcagtccttcttc
ttcacccacctgctcaacatcagtgaagccctgcagcagtgttgcgacctctcccagctc
tggttccgagaattcttcctggagttaaccatgggccggcgaatccagttccctattgag
atgtccatgccctggattctaacagaccatatcctggaaaccaaagaaccttctatgatg
gaatacgtcctctaccctttggatctgtacaacgacagcgcctactatgctctgactaag
tttaaaaagcagttcctgtacgatgagatcgaagctgaggtgaacctgtgttttgatcag
tttgtctacaagctggcggaccagatctttgcttactacaaagcaatggctggcagtgtc
ctgttggataaacgttttagggctgaatgtaagaattatggagtcatcattccataccca
ccatccaaccgctatgaaacgctgttgaagcagagacacgtccagctgttgggtagatca
attgacttgaacagactcattacccagcgcatctctgccgccatgtataaatccttggac
caggccatcagccgctttgagagtgaggacctgacctccatcgtggagctggagtggctg
ctggagatcaatcggctcacacaccggctgctgtgtaagcacatgaccctggacagcttc
gatgccatgttccgggaggccaatcacaacgtgtctgccccctacggccgcatcaccctg
cacgtcttctgggagctgaacttcgacttcctccccaactactgctacaatgggtccacc
aaccgttttgtccgaactgccattcctttcacccaagaaccgcaaagagataaacccgcc
aacgtccagccttattacctctatgggtccaagcctctcaacattgcctacagccacatc
tacagctcctataggaacttcgtgggaccccctcatttcaagaccatctgcagactcctg
ggttaccagggcatcgctgtggtcatggaggaactgctgaagatcgtcaagagcttgctc
caagggaccattctccaatatgtgaaaacactgatcgaggtcatgcccaagatatgccgc
ctgccccggcatgagtacggctccccagggatcctggagttcttccaccaccagctgaag
gacatcatcgagtacgcagagctcaaaaccgacgtgttccagagtctgagggaggtggga
aacgccatcctgttctgcctgcttatcgagcaagctctgtctcaggaggaagtctgtgat
ttgctccatgctgcacccttccaaaacatcttgcctagagtctacatcaaagagggggag
cgtttggaggtccggatgaaacgcctggaagccaagtacgcgccacttcacctggtccct
ctgatagagcggctggggacccctcagcaaatcgccatcgctcgggagggcgacctcctg
accaaggagcggctgtgctgcggcctgtccatgttcgaggtcatcctgacccgcatccgg
agctacctgcaggaccccatctggcggggccccccgcccaccaacggcgtcatgcacgtt
gacgagtgcgtggagttccaccggctgtggagtgccatgcagttcgtctactgcatcccc
gtggggaccaacgagttcacagctgagcagtgttttggagatggcctgaactgggctggc
tgctccatcatcgtcctgctgggccagcagcgtcgcttcgaccttttcgacttctgttac
cacctgctgaaagtacagaggcaggacgggaaggatgaaatcattaagaatgtgcccctg
aagaagatggcagacaggatcaggaagtaccagatcttgaacaatgaggtttttgccatc
ctgaataagtacatgaagtccgtggagacggacagttccaccgtggagcatgtgcgctgc
ttccaaccacccatccaccagtccctggccaccacctgctag
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