Phocoena sinus (vaquita): 116751643
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Entry
116751643 CDS
T07759
Symbol
NOTCH2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu01522
Endocrine resistance
psiu04330
Notch signaling pathway
psiu04658
Th1 and Th2 cell differentiation
psiu04919
Thyroid hormone signaling pathway
psiu05165
Human papillomavirus infection
psiu05200
Pathways in cancer
psiu05206
MicroRNAs in cancer
psiu05207
Chemical carcinogenesis - receptor activation
psiu05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116751643 (NOTCH2)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
116751643 (NOTCH2)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
116751643 (NOTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116751643 (NOTCH2)
05206 MicroRNAs in cancer
116751643 (NOTCH2)
05207 Chemical carcinogenesis - receptor activation
116751643 (NOTCH2)
09162 Cancer: specific types
05224 Breast cancer
116751643 (NOTCH2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116751643 (NOTCH2)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
116751643 (NOTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
Ank_5
NODP
Ank_3
Ank_4
EGF_3
EGF_Teneurin
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
116751643
NCBI-ProteinID:
XP_032483709
Ensembl:
ENSPSNG00000004012
LinkDB
All DBs
Position
1:complement(107120978..107297530)
Genome browser
AA seq
2485 aa
AA seq
DB search
MPALRPAPLWALLALWLCRATPALALQCRDGYEPCVNEGICVTYHNGTGYCKCPEGFLGE
YCQHRDPCEKNRCQNGGTCVAQAMLGKATCRCAPGFIGEDCQYSTTHPCFGSHPCLNGGK
CHVLSRDTYECTCQVGFTGKLCQWTDTCLSQPCANGSTCTTVANQFSCTCLAGFTGQKCA
SDVNECDVPGQCQHGGTCLNLPGSYQCQCPQGFTGQHCDSPYMPCAPSPCVNGGTCRQTG
DFAFECNCLPGFEGVTCERNIDDCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVD
ECLLQPNACQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASF
SCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGGDCTEDVDECA
MANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCKNDATCLDKIGGFTC
LCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTP
CLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCVCNPGYM
GAICSDQIDECYSSPCLNEGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASSPCVHGVCM
DGVNRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINDVNGFRCICPEGPHHPSCYSQ
VNECLSNPCVHGNCTGGLSGYKCLCDAGWVGINCEVDRNECLSNPCQNGGTCDNLVNGYR
CTCKKGFKGYNCLVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPN
PCENAGVCKEAPNFESYTCLCAPGWQGQRCTVDIDECVSKPCMNHGLCHNTQGSYMCECP
PGFSGMDCEEDIDDCLANPCQNGGSCVDGVNTFSCLCLPGFTGDRCQTDMDECLSEPCKN
GGTCSDYVNSYTCKCQAGFDGVHCENNIDECTESSCFNGGTCIDGINSFSCLCPLGFTGP
FCLHEINECNSHPCLNEGVCVDGLGTYRCICPLGYTGKNCQTLVNLCSRSPCKNKGTCIQ
EKAQSRCLCPSGWAGAYCDVPNVSCEVAASHRGVPVDRLCQHSGICISAGNSHHCQCPLG
YTGSYCEDQLDECSSNPCQHGATCRDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGG
TCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCVDRIGGYSCRCLPGFAGER
CEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCA
VASNMPDGFICRCPPGFSGARCQSSCGQVKCRRGEQCVHTASGPRCFCPNPQDCDSGCAS
SPCQHGGSCYPQRQPPYYSCKCSPPFWGSHCEFYTAPTSTPPATCLSQYCADKARDGVCD
EACNSHACQWDGGDCSLTMENPWANCSSPLPCWDYINNQCDELCNTAECLFDNFECQRNS
KTCKYDKYCADHFKDNHCDQGCNSEECGWDGLDCAADRPENLAEGTLVIVVLMPPEQLLQ
DARSFLRALGTLLHTNLRIKRDAQGDLMVYPYYGEKSAAMKKQRLTRRSLPGDQEQEVAG
GDVLQMFCHSHTTCSQVFLEIDNRQCVQDSDQCFKNTDAAAALLASHAIQGTLSYPLVSV
VSESLTPKRTQLIYLLAVAVVIVLFIILLGVIMAKRKRKHGSLWLPEGFTLRRDSSNHKR
REPVGQDAVGLKNLSVQVSEANLIGSGTSEHWVNDEGPQPKKAKAEDEALLSEEDDPIDR
RPWTQQHLEAADIRRTPSLALTPPQAEQEVDVLDVNVRGPDGCTPLMLASLRGGSSDMSD
EDEDAEDSSANIITDLVYQGASLQAQTDRTGEMALHLAARYSRADAAKRLLDAGADANAQ
DNMGRCPLHAAVAADAQGVFQILIRNRVTDLDARMNDGTTPLILAARLAVEGMVAELINC
QADVNAVDDHGKSALHWAAAVNNVEATLLLLKNGANRDMQDNKEETPLFLAAREGSYEAA
KILLDHFANRDITDHMDRLPRDVARDRMHHDIVRLLDEYNVTPSPPGTVLTSALSPVICG
PNRSFLSLKHTPTGKKSRRPNAKSVVPCSLPNLAKEAKDAKGSRRKKSLSDKGQLSESSV
TLSPVDSLESPHTYVSDTTSSPMITSPGILQASPNPVLATAAPPAPVHAQHALSFSNLHE
MQPLAHGANTVLPSVSQLLSHHHIVPPGSGSAGSLGRLHPVTVPADWMNRVEVSETQYNE
MFSMVLAPAEGTHPGITPQSRPPEGKHLPAPREPLPPIVTFQLIPKGSIAQPAGAAQPPS
SCPPAVAGTLPTMYQIPEMARLPSMAFPTAMMPQQEGQVAQTILPAYHPFPASVGKYPTP
PSQHSYASSNAAERTPSHSGHLQGEHPYLTPSPESPDQWSSSSPHSASDWSDVTTSPTPG
GAGGGQRGPGAHMSEPPRSNMQVYA
NT seq
7458 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccctgcgccccgctccgctgtgggcgctgctggcactgtggctgtgccgcgcg
acccccgcgcttgcattgcagtgtcgggacggctatgagccctgtgtaaatgaaggaata
tgtgttacctaccacaatggtacagggtactgcaaatgcccagagggattcttgggagaa
tattgtcaacatcgagacccctgtgagaagaaccgctgccagaatggtgggacatgtgtg
gcccaggctatgttggggaaagccacatgccgatgtgccccgggcttcataggcgaggac
tgccagtactcgaccactcacccctgctttgggtctcacccttgcctgaatggaggcaag
tgccacgtgcttagccgggatacctatgagtgcacctgccaagtcggttttacaggtaaa
ctgtgccaatggactgatacctgtctgtctcagccctgtgcaaatggaagtacctgtacc
actgtggccaaccagttctcctgcacatgcctcgcaggcttcacagggcagaagtgtgca
agtgatgtcaatgagtgtgatgttccaggacaatgccagcacggtggcacctgcctcaac
ctcccgggttcctatcagtgccagtgcccccagggcttcacaggccagcactgtgacagt
ccctacatgccctgtgcaccctccccctgtgtcaacggaggcacctgccggcagactggt
gacttcgcctttgagtgcaactgccttccaggttttgaaggggtcacctgtgagcggaat
attgatgactgtcctaatcacaagtgtcagaatggaggggtttgtgtggatggggtcaac
acttacaactgccgctgcccccctcagtggacaggacagttctgcacagaggatgtggat
gagtgcctgctgcaacccaatgcctgtcagaacgggggcacctgtaccaaccgcaatggg
ggctatggctgtgtgtgtgttaatggctggagtggagatgactgcagtgagaacattgat
gactgcgccttcgcctcctgcactccaggctccacctgcattgatcgtgtggcctccttc
tcttgcatgtgcccagaaggaaaggcaggtctcttatgtcatctggatgatgcatgcatc
agcaacccctgccacaagggggcactgtgtgacaccaaccctctgaacgggcagtatatt
tgcacctgtccacaaggctacaaagggggtgactgtacagaagatgtggatgagtgtgcc
atggccaatagcaatccttgtgagcatgcgggaaaatgtgtgaacacagatggtgccttc
cactgtgagtgtctgaagggctatgcagggcctcgttgcgagatggacatcaacgagtgc
cattcagacccctgcaagaatgatgccacctgtctggataagattggaggcttcacatgt
ctgtgcatgccaggtttcaaaggtgtgcattgtgaattggagataaatgaatgtcagagc
aacccttgcgtgaacaatggacagtgtgtggataaagtcaatcgcttccagtgtctgtgt
ccgcctggtttcactgggccagtttgccagatcgatattgacgactgttccagtactcca
tgtctgaatggggcaaagtgtatagatcacccaaatggttatgaatgccagtgcgccaca
ggattcactggtgtgttgtgtgaggagaacattgacaactgtgaccccgatccttgccac
catggccagtgtcaggatgggattgattcctacacctgcgtctgcaatccagggtacatg
ggcgccatctgcagcgaccagatagatgaatgttacagcagcccttgcttgaatgagggt
cgctgcatcgacctggtaaatggttaccagtgcaactgccagccaggcacatcaggtgtt
aattgtgaaatcaattttgacgactgtgcaagtagcccttgtgtccatggagtctgtatg
gatggcgttaatcgttacagctgcgtctgctcgccaggattcacagggcagagatgtaac
attgacattgatgagtgtgcctccaatccctgtcgcaagggtgcgacatgtatcaacgat
gtgaacggtttccgctgtatatgccctgaggggccccatcatcccagctgctactcacag
gtgaacgagtgcctgagcaatccctgtgtccacggaaactgtactgggggcctcagtgga
tacaagtgcctctgtgatgcaggctgggttggcatcaactgtgaagtggacagaaatgaa
tgtctttctaatccatgccagaacggaggaacttgtgacaatctggtgaatggatacagg
tgcacttgcaagaagggctttaaaggctataactgtctggtgaatattgatgaatgtgct
tcgaatccatgtctgaaccaaggaacctgctttgatgatataagtggttatacctgccac
tgtgtactgccatacacaggaaagaactgtcagactgtattagctccctgttccccaaac
ccttgtgagaatgctggtgtttgcaaagaggcaccaaattttgagagttacacctgcctg
tgtgctcctggctggcaaggtcagcggtgtacagttgacattgacgagtgtgtctccaag
ccctgcatgaaccacggtctctgccataacacccagggcagctacatgtgcgagtgtcct
ccaggcttcagtggtatggactgtgaggaggacatcgatgactgccttgccaatccttgc
cagaatggaggttcctgtgtagacggagtgaatactttctcctgcctatgccttccgggc
ttcacgggggacaggtgtcagacagacatggatgagtgtctgagtgaaccctgtaagaac
ggagggacctgctctgactatgtcaacagttacacctgcaagtgccaggcgggatttgat
ggagtccactgtgagaacaacattgacgagtgcactgagagctcctgtttcaacggtggc
acatgtatcgatgggattaactccttctcttgcttgtgccccttgggcttcactggcccc
ttctgcctccatgagatcaatgaatgcaactctcatccatgcctgaatgaaggagtatgt
gttgatggcctgggtacctaccgctgcatctgcccattgggctacactgggaaaaactgt
cagaccctggtgaacctctgtagtcggtctccatgtaaaaacaaaggtacttgcattcag
gaaaaagcacagtcccggtgcctgtgtccgtctggatgggctggtgcttactgtgacgtg
cccaatgtctcctgtgaggttgcggcctcccacagaggggtgcccgttgaccgcctgtgc
cagcactcaggcatctgtatcagtgctggcaactcgcatcactgccagtgccccctgggc
tacaccgggagctactgtgaggatcagctggatgagtgctcgtccaatccttgccagcac
ggagccacctgcagggacttcattggtggatacagatgtgagtgtgtcccaggatatcag
ggtgtcaactgcgagtatgaagtggatgagtgccagaaccagccatgccagaatggaggc
acctgtatcgaccttgtgaaccatttcaagtgctcctgcccaccaggcactcggggcctg
ctttgtgaagagaacattgatgactgtgccaggggtccccactgccttaatggtggtcag
tgtgtggataggattgggggctacagttgtcgctgcttgcctggctttgctggagagcga
tgtgagggagacatcaacgagtgcctctccaacccctgcagctctgagggcagcctagac
tgcatacagcttaccaatgactacctgtgtgtctgccgcagtgcctttaccggtcgtcac
tgtgaaacgttcgtcgatgtgtgtccccagatgccttgcctgaacggagggacttgtgct
gtggccagcaacatgcctgatggtttcatttgtcgttgtcccccgggattctctggggcg
agatgccagagcagctgtggacaggtgaagtgtaggagaggggagcagtgtgtgcacaca
gcctcaggaccccgctgcttctgccccaacccccaggactgcgactcaggctgtgccagt
agcccctgccagcacgggggcagctgctaccctcagcgccagcctccttattactcttgc
aagtgttccccaccgttctggggcagccactgtgaattctacacagctcccaccagcacc
cctcctgccacctgtctgagccagtattgtgccgacaaagctcgggatggcgtctgcgat
gaggcctgcaacagccatgcctgccagtgggatgggggtgactgttccctcaccatggag
aacccctgggccaactgctcctccccgcttccctgctgggattacatcaacaaccagtgt
gatgagctgtgcaacacggctgagtgcctgtttgacaactttgaatgccagaggaatagc
aagacgtgcaaatatgacaaatactgtgcagaccacttcaaagacaaccattgtgaccag
ggatgcaacagtgaggagtgtggctgggatgggctggactgtgctgctgaccggccagaa
aacctggcagagggtaccctggtaattgtggtgctgatgccacctgaacagctgctccag
gatgctcgcagcttcttgcgggcactgggcaccctgctccacaccaacctacgcatcaaa
cgggatgcccagggggaccttatggtctacccctattatggtgaaaagtcagctgccatg
aagaagcagagattgacacgcaggtcccttccaggcgatcaagaacaggaagtggctggt
ggtgacgttctgcagatgttctgtcattcacacaccacatgctctcaggtattcctggaa
attgacaaccgccagtgtgtccaagactcagaccagtgcttcaagaatacggatgcggca
gcagctcttctggcgtctcacgccatccaggggaccctgtcgtaccctcttgtgtctgtt
gtcagtgaatccctgaccccaaaacgcacccagcttatctatctacttgctgttgctgtt
gttattgtcttgtttattatcctgctgggggtgatcatggcaaaacgaaagcgtaagcat
ggctccctctggctgcctgaaggcttcacccttcgccgtgactccagcaatcacaaacgt
cgtgagccagtgggacaggatgctgtggggctgaaaaatctctcagtgcaagtctcagag
gctaacctaattggttctggaacaagtgaacattgggtcaacgatgaagggccccagcca
aagaaagccaaggctgaagatgaggctttactctcagaagaagatgatcccatcgaccga
cggccgtggacacagcagcaccttgaagctgcagatatccgtaggacaccatcgttggct
ctcactcctccgcaggcagagcaggaggtggatgtgctggatgtgaacgtccgcggccca
gatgggtgcaccccactgatgctggcttctcttcgaggaggcagctcagatatgagtgat
gaagatgaagatgcagaggactcttccgccaacatcatcacagacttggtctaccagggt
gccagcctccaagcccagacagaccggactggtgagatggccctgcatcttgcagcccgc
tactcgagggctgacgctgccaagcgcctcctggatgcaggtgccgatgccaatgcccag
gacaacatgggccgctgccctctccatgccgccgtggcagccgatgcccaaggtgtcttc
cagatactgatccgcaaccgagtaactgatctagatgccaggatgaatgatggcacgaca
cccctgatcctggctgcccgcctagctgtggagggaatggtggcggagttgatcaactgc
caagccgatgtgaatgcagtggacgaccacggaaaatctgctcttcactgggcagctgct
gtgaataatgtggaggcgacccttttgctgttgaaaaatggggccaaccgagacatgcag
gacaacaaggaagagacccctctgtttctcgctgcccgggaggggagctatgaagcagcc
aagatcctgttagaccattttgccaatcgggacatcacagaccacatggatcgtcttccc
cgggacgtggcccgggaccgcatgcaccatgacattgtacgcctgctggatgagtacaat
gtgaccccgagccctccaggcaccgtgctgacttctgctctctcacctgtcatctgtgga
cccaacagatcttttctcagtctgaagcacaccccgacgggcaagaagtccagacggccc
aatgccaagagtgttgtgccctgtagcctccctaaccttgccaaggaggccaaggatgcc
aaggggagtaggaggaagaagtctctgagtgacaagggccagttgtctgagagctcagtg
actctgtcccccgttgattccctagaatctcctcacacgtatgtttctgataccacatcc
tctccgatgattacatcccccggaatcttacaggcctcacccaaccctgtgttggccact
gctgccccccctgccccagtccatgcacagcatgcactgtctttctctaaccttcatgag
atgcagcccttggctcacggggccaacactgtgcttccctcagtgagccagctgctgtca
caccaccacattgtccccccaggcagtggcagtgcggggagcttgggtaggctacatcca
gtcactgtcccagcggactggatgaaccgtgtggaggtgagtgagacccagtacaacgag
atgtttagtatggtcctggctccagctgagggcactcaccctggcataactccccagagc
aggccgcctgaagggaagcatttacctgcccctcgagagcccttgccccccatcgtgact
ttccagctaatccccaaaggcagcattgcccaaccagccggggctgcccagcctccatcc
agctgccctccagctgttgcaggcaccctgcccaccatgtatcagattccagaaatggct
cgtttgcccagtatggcttttcccactgccatgatgccccagcaggaagggcaggttgct
cagaccattctcccagcctaccatccctttccagcctctgtgggcaagtatcccacaccc
ccttcacagcatagctatgcttcctccaatgctgctgagagaacgcccagtcacagtggt
cacctccagggtgagcatccctacctgacaccatccccagagtctcctgaccagtggtca
agttcatccccccactctgcttctgactggtcagatgtgaccaccagccccactcctggg
ggtgctggaggaggtcagcggggacctggggcacacatgtctgagccaccacgcagcaac
atgcaggtctatgcatga
DBGET
integrated database retrieval system
