Phocoena sinus (vaquita): 116751697
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Entry
116751697 CDS
T07759
Symbol
SNX2
Name
(RefSeq) sorting nexin-2
KO
K17917
sorting nexin-1/2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116751697 (SNX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116751697 (SNX2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116751697 (SNX2)
Membrane trafficking [BR:
psiu04131
]
Endocytosis
Macropinocytosis
Sorting nexins
116751697 (SNX2)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116751697 (SNX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
Sorting_nexin
PX
BAR_3_WASP_bdg
FAM92
GrpE
HMMR_N
HR1
DUF4618
Motif
Other DBs
NCBI-GeneID:
116751697
NCBI-ProteinID:
XP_032483813
Ensembl:
ENSPSNG00000003442
UniProt:
A0A8C9BDK8
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Position
3:complement(71139938..71201084)
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AA seq
519 aa
AA seq
DB search
MAAEREPPPLGVGKPTDFEELEDGEDLFTSTVSTLESSPSSPDPASLITEDISTNSNGPK
PAEVVLDDDREDLFAEATEEVSLDSPEREPILSSEPSPAVTPVTPTTLIAPRIESKSMSA
PVIFDRSREEIEEEANGDVFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSLSMFSKSEFSV
KRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALE
RYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQALSGAGILRMVNKAADAVNKMTIKMN
ESDAWFEEKQQQFENLDQQLRKLHASVEALVCHRKELSANTAAFAKSAAMLGNSEDHTAL
SRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRMKCWQKWEDA
QVTLLKKRETEAKMMVANKPDKIQQAKNEIREWEAKVQQGERDFEQISKTIRKEVGRFEK
QRVKDFKTVIIKYLESLVQTQQQLIKYWEAFLPEAKAIA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagagggagcctcctccgctgggggtcgggaaacccaccgactttgaggaa
ctggaggacggagaggacctgttcaccagcactgtctccaccttagagtcaagtccatca
tctccagatccagctagtcttattacagaagatattagtacgaactccaatggtccaaaa
cctgcagaagttgtgctggatgatgacagagaagatctttttgcagaagctacagaagaa
gtttctctggacagtccagaaagggaacctatactctcctcagaaccttctcctgcagtc
acacctgtgacccccacgacactcattgctcccagaattgaatcaaagagtatgtctgct
cctgtgatctttgacagatccagggaggagattgaagaagaagcaaatggagatgttttt
gatatagaaattggtgtatcagatccagagaaagttggtgatggcatgaatgcttacatg
gcttatagagtaacaacaaagacttctctttccatgttcagtaagagtgaattttcagtt
aaaagaagatttagtgactttctcggtttgcatagcaagttagcaagcaagtatttacat
gtcggttatattgtgccaccagctccagaaaaaagtatagtaggcatgaccaaggtcaaa
gtgggtaaagaagattcatcatccacagaatttgtagaaaaacgaagagcagctcttgaa
aggtatcttcaaagaacagtaaagcatccgactttactacaggatcctgatttaaggcag
ttcttggaaagttcagagctgcctagagcagttaatacacaggctctgagtggagcagga
atattgaggatggtgaacaaggctgccgacgctgtcaacaaaatgacaatcaagatgaat
gaatcggatgcctggttcgaagaaaagcagcagcaatttgaaaatctggatcagcaactt
aggaaacttcatgccagtgttgaagccttggtctgtcatagaaaagaactttcagccaac
acagctgcctttgctaaaagtgctgccatgttaggtaattctgaagatcatactgcactg
tctagagctttgtctcagcttgcagaggttgaggagaagatagaccagttacatcaagaa
caagcttttgctgacttttatatgttttcagaactacttagtgactacattcgtcttatt
gctgcagtgaaaggtgtatttgaccatcgaatgaagtgctggcagaaatgggaagacgct
caagttactttgctcaaaaaacgtgaaactgaagcaaaaatgatggttgctaacaaacca
gataaaatacagcaagctaaaaatgaaataagagagtgggaggcaaaagtgcaacaagga
gaaagagattttgaacagatctctaaaacaattcgaaaagaagtgggaagatttgagaaa
caacgagtgaaagattttaaaactgttattatcaagtacttagaatcattagtacaaaca
caacaacagctgataaaatactgggaggcatttctacctgaggccaaagccattgcctag
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