Phocoena sinus (vaquita): 116751768
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Entry
116751768 CDS
T07759
Symbol
TRIM41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41 isoform X1
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116751768 (TRIM41)
Enzymes [BR:
psiu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116751768 (TRIM41)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116751768 (TRIM41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
Apolipoprotein
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
116751768
NCBI-ProteinID:
XP_032483958
Ensembl:
ENSPSNG00000003237
LinkDB
All DBs
Position
3:14392619..14403678
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AA seq
641 aa
AA seq
DB search
MAAVAMAPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD
REEEEEDGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMGGSNWENM
DYVWEEEDEEEDLDYYLGNVEGDLRGEDEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCF
TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRGNEQGICPKHQEALKLFCEVD
EEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTE
LKVVSTIPFASSQSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAA
SRLSEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSH
DFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHSKRFS
ADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVGSGDASSSSR
HHHRRRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGR
LGFYNAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgttgccatggcacccaaccctgtgcagacccttcaggaggaggcggtgtgc
gccatctgcctcgattacttcacggaccctgtgtccatcggctgcgggcacaacttctgc
cgagtgtgtgtaacccagctgtggggaggggaggatgaagaggacagggacgagttagac
cgggaggaagaggaggaggacggagaggaggaggaagtggaggctgtgggggccggtggg
gggtgggacacccccatgcgggatgaagactatgagggcgacatggaggaggaagtcgag
gaggaagaggagggtgtgttctggaccagtggcatgggcgggtccaactgggaaaacatg
gactacgtgtgggaggaggaggacgaggaggaagacctggactactacttggggaacgtg
gagggggacctgaggggggaggatgaggaggatgaggaggaagtgctggaggaggacgag
gaagaggagctagatcccgtcaccccactgcccccgcctccagcccctcggaggtgcttc
acctgcccccagtgccgcaagagctttcccaggcggagcttccgccccaacctgcagctg
gctaacatggtccaggtgattcggcagatgcacccaacccctggtcgagggagccgtggg
aacgagcagggcatttgtcccaaacaccaagaagccctgaagctcttttgcgaggtggat
gaagaagccatctgtgtggtgtgccgagaatccaggagccacaaacagcacagcgtggtg
ccattggaggaggtggtgcaggagtacaaggccaaactgcaggggcatgtggaaccactg
aggaagcacttggaggctgtgcagaagatgaaggccaaggaggagaggcgggtgacagag
ttgaaggtggtatccaccatcccctttgcatcatcccagagccagatgaagtcagagctg
gcagctgtggcctcagaatttgggcggctgacacggtttctggccgaagagcaggcaggg
ctagagcggcgcctccgagagatgcacgaagctcagctggggcgcgcgggagcagcggcc
agccgcctctcggagcaggctgcccagctgagccgcctgctggctgaggcccaggagcgg
agccagcaggggggcctgcggctgctccaggacatcaaggagactttcaataggtgtgaa
gaggtacagctgcagcccccagaagtctggtcccctgacccgtgtcaaccccatagccat
gacttcctgacagacgccatcgtgaggaaaatgagccggatgttctgtcaggctgcccga
gtggacctgacgctggaccctgacacggctcacccggccctgatgctgtcccctgaccgc
cggggggtccgcctggcagagcggcggcaggaggttgctgaccattccaagcgcttctcg
gcagactgctgcgtgctgggggcccagggcttccgctctggccggcactactgggaggta
gaggtgggcgggcggcggggctgggcagtgggtgctgcccgtgaatcaacccatcataag
gagaaggtgggctctggggggtcctctgtgggcagcggtgatgccagctcctcctctcgc
catcaccaccgccgccgccggctccacctgccccagcagcccctgctccagcgggaagtg
tggtgtgtgggcaccaatggcaaacgctaccaggcacagagctcaacggagcagacactg
ctgagcccaagtgagaaaccaaggcgctttggtgtgtacctggactatgaggccgggcgc
ctgggcttctacaatgcagagactctggctcacgtgcacaccttttcggctgccttcctg
ggcgagcgtgtcttccctttcttccgggtgctctccaagggtacccgtatcaagctctgc
ccttga
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