Phocoena sinus (vaquita): 116751820
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Entry
116751820 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: ruvB-like 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03082
ATP-dependent chromatin remodeling
psiu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116751820
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116751820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116751820
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116751820
Enzymes [BR:
psiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116751820
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
116751820
Chromatin remodeling factors
SRCAP complex
116751820
INO80 complex
116751820
INO80 complex (yeast)
116751820
SWR1 complex
116751820
ASTRA complex
116751820
Cilium and associated proteins [BR:
psiu03037
]
Motile cilia and associated proteins
Dynein assembly factors
116751820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
RuvB_N
AAA
AAA_22
AAA_25
bpMoxR
AAA_5
Mg_chelatase
Parvo_NS1
AAA_16
Sigma54_activat
IstB_IS21
AAA_19
AAA_18
nSTAND3
DnaB_C
TsaE
AAA_28
ResIII
Zeta_toxin
AAA_11
PhoH
AAA_7
RBD_LARS1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
116751820
NCBI-ProteinID:
XP_032484048
LinkDB
All DBs
Position
3:complement(48062928..48064298)
Genome browser
AA seq
456 aa
AA seq
DB search
MKIEKVNSTTKTQHLTSHSHVKGLELVERGLAKAVASEFAGQENACKARSVIVELIKSKK
MAGNAVLLAGPPGTGKTGLALAIAQELGSKVPFCWMVGSEVYSMEIKETEVLIENFHRAI
GLRLKETKEVYEGEVTELTPCETENPMEGXGKTISHIIIGLKIAKGTKQLKLDPSVFESL
QKERVKAGDVIYIEANSGAMKRQGRCDTYATEFDLEAEEYVPLPKGDVHNKKEIIQDVTL
HDLDVANAWPQWGHNILSLMGQLMKPKKMEITDKLXGEINKVVNKYIHQGVAELVLGVLF
VDEVHMLDIECFTYLHQALESSIAPTVIFASNRGNRVIRGTEDITSPHGIPLDLLDRVMI
IQTMVYTLQELKQIIKIQAQTEGIHISEKALNHLGEIGTKTTLRYTVQLLTLANLLAKIN
GKDGTEKEHIKKISELCYDAKSSAKILADQQDKNKK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgagaaggtgaacagcaccaccaagacacagcacctcacctctcacagccat
gtgaaggggctggagctggtcgagagaggcctggccaaggcggtggcctcagagttcgcg
ggccaggagaacgcgtgcaaggcacgtagtgtgatagtggaattaatcaaaagcaagaaa
atggctggaaatgctgttttgttggcagggcctcctggaactggcaagacaggtctagct
ctggctattgctcaggaactgggtagtaaggtccctttctgctggatggtggggagtgaa
gtttactccatggagatcaaggagacagaagtgctgatagagaacttccacagggctatt
gggctgcggctaaaggagaccaaggaggtatatgaaggcgaggtcacagagctcacccca
tgtgagacggagaaccccatggagggctagggcaagaccatcagccacataatcataggg
ctcaagatagccaaggggaccaagcagttgaaactggaccccagcgtttttgaaagtttg
cagaaagagcgagtgaaagctggagatgtgatttacatcgaagccaacagtggggccatg
aagaggcagggcaggtgtgatacctatgccacagaattcgaccttgaagctgaagagtac
gtccccttgcccaagggagatgtgcacaacaagaaggaaatcatccaagacgtgaccttg
catgacttggatgtggccaacgcatggccccagtggggacacaacatcctgtccctgatg
ggccagctcatgaagccaaagaagatggagatcacagacaaactctgaggggagattaac
aaggtggtgaacaagtacatccaccagggcgtggcagagctggttctgggggttctgttc
gttgatgaggtccacatgctggacatcgagtgcttcacctacctgcaccaggcattggag
tcttccatcgcccccactgtcatctttgcatccaaccgaggcaaccgtgtcatcaggggc
acggaggacatcacctctcctcacggcatccctctcgaccttctggaccgagtgatgatc
atccagaccatggtgtacaccctgcaggagttgaaacagatcattaaaatccaagctcag
acagagggaatccacatcagtgagaaggcgctgaaccacctgggggagattggtaccaag
accactctgaggtacacggtgcagctgctgaccctggccaacctgctggccaagatcaac
gggaaggacggcactgagaaggagcacatcaagaagatcagtgagctctgctacgatgcc
aagtcctcagccaaaatcctggctgaccagcaggacaagaacaagaagtga
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