Phocoena sinus (vaquita): 116751824
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Entry
116751824 CDS
T07759
Symbol
HDGFL2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116751824 (HDGFL2)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116751824 (HDGFL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
116751824
NCBI-ProteinID:
XP_032484055
Ensembl:
ENSPSNG00000015186
UniProt:
A0A8C9CH00
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All DBs
Position
3:3531387..3549761
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AA seq
663 aa
AA seq
DB search
MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPLPVSSSDSEAPEADPAVGSEDDEDR
GVMAVTAVTAAAASDRMESDSDSDKSSDNSGLKRKAVALKMSVSKRARKASSDLDQASMS
PSEEENSESSSESEKTSDQDFTPEKKAVVRAPRRGPLPGRKKKKAPSASDSDSKAESGGA
KAEPAAVARSVSSSSCSSSSDSDASVKKPPRGRKPAEKPPPKPRGRKPKAERPPTTSSSD
SDSDEVDRISEWKRRDEERRRELEARRRREQEEELRRLREREKEEKERRRGRERGEAARA
GSAGSSGDELKDDDEPVKKRGRKGRGRGPQSSSDSEPEAELDREVKKSAKKLHLQSTEPA
RRPSQKDKRGRPEEKPRARPAKMERTRKRSEGFPPDRKVEKKKEPSVEEKLQKLHSEIKF
ALKVDNPDVKRCLNALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKEVMEKAAEVYA
RLKSRVLGPKIEAIQKATRTGPEKAEEILAGEEAPAERAEDEASTDLSAPVNGEATSQKG
ESMEDKEPEEGQNSEEGPGGGSSEDPSHNDSAREGPDLDGPGKERQERERLRVDSESLDD
EDS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgccttcaagcccggggacttggtgttcgccaagatgaagggctacccgcac
tggccggcccggatcgatgacatcgccgacggtgccgtgaagcccccgcccaacaagtac
cccatcttcttctttggtacccacgaaacagccttcctgggacccaaggacctgtttccc
tacgacaaatgtaaagataagtacgggaaacccaacaagaggaaaggcttcaatgagggc
ctgtgggagatccagaacaacccccatgccagctacagtgctcctctgccggtgagctcc
tccgacagtgaggcccctgaagccgatccggcagttggcagtgaggacgacgaggaccgg
ggggtcatggcggtcacagccgtgaccgctgcagccgccagcgacagaatggagagtgac
tcggactcggacaagagcagtgacaacagcggcctcaagcggaaggcagtggccttgaag
atgtcggtctcaaaacgagctcgaaaggcctccagtgacctggatcaagccagcatgtct
ccatctgaggaggagaactcggaaagctcctccgagtcagagaagaccagtgaccaggac
ttcacccccgagaagaaagccgtggtccgggccccacggcggggtccccttccaggacgg
aagaaaaagaaggcgccgtcagcctccgactcggactccaaagcagaatcaggcggggcc
aaggctgagcctgcggccgtggcgaggtcggtgtcctcctcctcctgctcgtcctcctcc
gactcggacgcttccgtaaagaagcctcctcggggcaggaagccagccgagaagcctccc
cccaagccccgtgggcggaaaccgaaggctgagcggccaccgaccacctcgagcagcgac
agcgacagcgacgaggtggaccgcatcagcgagtggaagcgccgggacgaggagcggcgg
cgcgagctggaggcgcggcggcgcagggagcaggaggaggagctgcggcggctgcgtgag
cgcgagaaggaggagaaggagcggcggcgcgggcgggagcgcggggaggcggcgcgtgcg
ggcagcgccggcagcagcggcgacgagctcaaggacgatgacgagcccgtcaagaagcgc
ggccggaagggccggggccggggcccccagtcctcctccgactcggagcccgaggccgag
ctggacagagaggtgaagaaatcagcgaagaagttgcacctgcaaagcacagagcccgcg
cggagacccagccagaaggataagagagggcgccccgaggagaagccccgggccaggccc
gcgaaaatggaacggacccggaagcggtcggaagggttcccaccagaccggaaggttgag
aagaagaaagaaccttccgtggaggagaagcttcagaagctgcacagcgagatcaagttc
gccctgaaggttgacaatccggatgtgaagaggtgtctgaacgcgttagaggaactaggg
accctgcaggtgacctcacagatcctccagaagaacacggacgtggtggccacgttgaag
aagatccgccgctacaaggccaacaaggaggtgatggagaaagctgcggaggtctacgcc
cggctcaagtctcgggtcctgggaccaaagatcgaggctatccagaaggcgaccagaact
gggccggagaaggccgaggagatactggccggagaggaggcccctgcggagagggcagag
gacgaggcgagcactgatctctcggcccctgtgaacggcgaggcgacgtcccagaagggg
gagagcatggaggacaaggagccggaggaaggacagaactcagaagaggggccagggggc
ggctcctctgaagatccatcacacaacgacagcgcgcgggagggccccgacctggacggg
cccgggaaggagcggcaggagcgagagaggctgcgggtggactcggagtccctggacgac
gaggacagctga
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