Phocoena sinus (vaquita): 116751850
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Entry
116751850 CDS
T07759
Symbol
IRX4
Name
(RefSeq) iroquois-class homeodomain protein IRX-4
KO
K24889
iroquois-class homeodomain protein IRX
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116751850 (IRX4)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116751850 (IRX4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
116751850
NCBI-ProteinID:
XP_032484127
Ensembl:
ENSPSNG00000002071
UniProt:
A0A8C9DXJ9
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Position
3:173085392..173089460
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AA seq
522 aa
AA seq
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MSYPQFGYPYSSAPQFLMTTNSLSTCCESGGRTLADSRPSASAQAPVYCPVYESRLLATA
RHELNSAAALGVYGGPYGGSQGYGNYVTYGSEASAFYSLNSFDSKDAPGSAHAGLAPAAA
TAYYPYEPALGQYPYDRYGTMDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLA
IITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADEKRPYAEGEEEEGGEEEAREQPL
KSTKGAEPTDKEKDLELSDLDDFDPLEGEPPECELKPPFQPLDGGLDRVPTVPDGPSTPG
KEAPGALRMPLAAGGGATLEQDLERARSCLRSTAARPEHQAGAGAAVGPQACEPKLGFAP
AGASAGLEAKPRIWSLAHTATAAAATALGQTEFPSCMLKRRGPAGPAAPSSAPASSSPAA
PAPAGALDRHQDSPVTSLRNWVDGVFHDPILRHSTLNQAWATAKGALLDPGPPGRSLGGG
ANVLTTPLARSFPPAAPQDAPASGAAKELLATPKAGGKPFCA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccgcagtttgggtacccctactcctcggcaccccagttcctgatgaccacc
aactccctgagcacgtgctgcgaatccggtggccgcacgctggccgactccaggccgtct
gcctcagcccaggcgcccgtctactgcccggtctacgagagccggctgctggccaccgcg
cgccacgagctgaactcggcggcggcgcttggcgtctatgggggcccctacggcggctcg
cagggctacggcaactacgtgacctacggttctgaggcgtctgccttttactcgctgaac
agcttcgactccaaggacgcaccgggatctgcgcatgcgggcctcgctccggctgcagcc
acagcctactacccctacgagccggcgttgggccagtacccctacgacaggtacgggacc
atggacagcggcacgcggcggaagaacgccacgcgcgagaccaccagcaccctcaaggcc
tggctgcaggagcaccgcaagaacccctaccccaccaagggcgagaagatcatgctggcc
atcatcaccaagatgaccctcacgcaggtctccacctggttcgccaacgcgcgccggcgc
ctcaagaaggagaacaagatgacgtggccgccgaggaacaagtgtgcggatgagaagcgg
ccctacgcggagggcgaggaggaagaggggggcgaggaggaagccagggagcagcccctc
aagagcaccaaaggtgcagagcccacagacaaagagaaggatctggagctcagcgacttg
gacgacttcgaccccctggagggggagcccccagagtgcgagctgaagccgcccttccaa
cccctggatggaggcctggatcgagtccccaccgtgccagacggccccagcaccccaggg
aaggaggctccgggcgccctccggatgcccctggccgccgggggtggggccactctggaa
caggacctggagagggcccggagctgcctccggagcacggcggctcggccggagcaccag
gcgggcgcgggcgcggcggttggcccgcaggcctgcgagcccaagctgggctttgctcca
gcgggggcgtcggcgggcctcgaggccaagccgcgcatctggtccctggcacacacggcc
accgcggccgccgccaccgccctcggccagactgagtttccctcgtgcatgctcaagcgc
cgtggccccgctggccctgcggccccctcctcggcgcccgcctcctcctcgcctgcggcc
ccggctcccgccggtgccctggacaggcaccaggactccccggtaaccagtctcagaaac
tgggtggacggggtcttccacgaccccatcctcagacacagcactttgaaccaggcctgg
gccaccgccaagggcgccctcctggacccggggccgccgggccgctcgctgggggggggc
gccaacgtgctgacgacgcccctggcgcgctccttcccgcccgccgcgccccaagacgcc
cccgcctccggcgcagccaaggagctgctggccacgcccaaggccggcggcaagcccttc
tgcgcctag
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