KEGG   Phocoena sinus (vaquita): 116751979
Entry
116751979         CDS       T07759                                 
Symbol
CALR
Name
(RefSeq) calreticulin isoform X1
  KO
K08057  calreticulin
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04141  Protein processing in endoplasmic reticulum
psiu04145  Phagosome
psiu04148  Efferocytosis
psiu04612  Antigen processing and presentation
psiu05142  Chagas disease
psiu05163  Human cytomegalovirus infection
psiu05166  Human T-cell leukemia virus 1 infection
psiu05168  Herpes simplex virus 1 infection
psiu05169  Epstein-Barr virus infection
psiu05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116751979 (CALR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116751979 (CALR)
   04148 Efferocytosis
    116751979 (CALR)
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    116751979 (CALR)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    116751979 (CALR)
   05170 Human immunodeficiency virus 1 infection
    116751979 (CALR)
   05168 Herpes simplex virus 1 infection
    116751979 (CALR)
   05163 Human cytomegalovirus infection
    116751979 (CALR)
   05169 Epstein-Barr virus infection
    116751979 (CALR)
  09174 Infectious disease: parasitic
   05142 Chagas disease
    116751979 (CALR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:psiu03110]
    116751979 (CALR)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:psiu04091]
    116751979 (CALR)
Chaperones and folding catalysts [BR:psiu03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   116751979 (CALR)
Lectins [BR:psiu04091]
 L-type lectins
  116751979 (CALR)
SSDB
Motif
Pfam: Calreticulin
Other DBs
NCBI-GeneID: 116751979
NCBI-ProteinID: XP_032484386
Ensembl: ENSPSNG00000006361
UniProt: A0A8C9BGR8
LinkDB
Position
3:complement(9712035..9716170)
AA seq 417 aa
MLLPVLVLLGLLGLGAAEPAVYFKEQFLDGDGWTERWIESKHKPDFGKFVLSSGKFYGDQ
EKDKGLQTSQDARFYALSARFEPFSNKGHTLVVQFTVKHEQNIDCGGGYVKLFPDGLDQT
DMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDN
TYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKVDDPTDSKPEDWDKPE
HIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGIWIHPEIDNPEYS
PDSNIYAYENFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDK
QDEEQRLKEEEEEKKRKEEEEADKEEEEDKDEDEEDEDEKEEEDEEDAAAGQAKDEL
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgctgctacccgtgctggtgctgctcggccttcttggcctgggcgccgctgaacccgcc
gtttacttcaaggagcagtttctggacggagacggatggaccgagcgctggatcgaatcc
aaacacaaaccagattttggcaaattcgttctcagttccggcaagttctacggtgaccag
gagaaagataaagggctgcagacaagccaggatgcccggttttatgctctgtcggccaga
ttcgagcccttctccaataagggtcatacactggtggtgcagttcaccgtgaaacacgaa
cagaacatcgactgtgggggcggctacgtgaagctatttccagatggtctggaccagaca
gacatgcatggagactctgaatacaacatcatgtttggcccggacatctgtggtcctggc
accaagaaggttcatgtcatcttcaactacaagggcaagaacgtgctgatcaacaaggat
atccgttgcaaggacgatgaattcacacacctgtacacgctgattgtgcggcctgataat
acctatgaggtaaagatcgacaacagccaggtggagtcaggctccctggaggacgattgg
gatttcttgcctcccaagaagataaaggatcctgatgctgcaaagcctgaagactgggac
gagcgagccaaggttgatgaccctacggactccaagcctgaggactgggacaagcctgag
cacattcctgaccccgatgctaagaagcccgaggactgggatgaagagatggatggagag
tgggaaccaccagtgattcagaacccagagtacaagggtgagtggaagccccgacagatt
gacaacccagattacaagggcatttggatccacccagagatcgacaaccctgagtattcc
cctgatagcaacatctacgcctatgaaaactttgctgtactgggcttggatctatggcag
gtcaagtctggcaccatctttgacaacttcctcataaccaacgacgaagcatacgctgag
gagtttggcaacgagacatggggtgttacgaaggcagcagaaaaacaaatgaaggacaag
caagacgaagagcagaggctaaaggaggaggaggaggagaagaagcgcaaggaagaggag
gaggcagacaaggaagaggaggaggacaaggatgaggatgaggaggatgaggacgagaaa
gaggaagaggacgaggaagacgctgccgctggccaggccaaggatgagctgtag

DBGET integrated database retrieval system