Phocoena sinus (vaquita): 116752000
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Entry
116752000 CDS
T07759
Symbol
GTF2F1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116752000 (GTF2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116752000 (GTF2F1)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
116752000 (GTF2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
116752000
NCBI-ProteinID:
XP_032484439
Ensembl:
ENSPSNG00000018932
LinkDB
All DBs
Position
3:complement(5016467..5026888)
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AA seq
541 aa
AA seq
DB search
MAALGPSSQNVTEYVVRVPKNTTKKYNIMAFNAADKVNLATWNQARLERDLSNKKIYQEE
EMPESGAGSEFNRRLREEARRKKYGIVLKEFRPEDQPWLLRVNGKSGRKFKGIKKGGVTE
NTSYYIFTQCPDGAFEAFPVHNWYNFTPLAKHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQDQDEEDEEKEKRGRKKASELRIHDLEDDLEMSSDDSEASGEEGGRALKAKKKAPP
SKGGRKKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSSQDELEGKPKVTQQEEGPKG
VDEQSESSEESEEEKPPEEDKEDEEEKKAPTPQDKKRKKDSSEESDSSEESDIDSEASSA
LFMAVRPSPGRGDGVSLSRLTSPTPVSQKKKTPPKRERKQSGGSSRGNSRPGTPSTETGS
TSSTLRAAANKLEQGKRTSETPAAKRLRLDTGPQSLSGKSTPQPQSGKSTPSSGDVQVTE
DAVRRYLTRKPMTTKDLLKKFQTKKTGLSSEQTVNVLAQILKRLNPEHKMINDKMHFSLK
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctcggccccagcagccagaatgtcactgagtatgtcgtccgagtccccaaa
aataccaccaaaaaatataatatcatggctttcaatgcagccgataaagtcaacctcgct
acttggaatcaggcccggctggaacgcgacctgagcaacaagaagatttaccaagaggag
gagatgcctgagtcgggcgccggcagcgagttcaaccgcaggctccgggaggaggcgcgg
aggaagaagtacggcatagtcctcaaggagttccggcccgaggaccagccttggctgctc
cgagtcaatggcaaatcaggccggaagttcaagggcataaagaagggaggtgtgacagag
aacacatcctactacatctttacccagtgccctgatggggcttttgaggccttccccgtg
cacaactggtacaacttcacgccgctggccaagcaccgcacgctcacggccgaggaggcc
gaggaggagtgggagaggagaaacaaagtcctgaaccacttcagcatcatgcagcagcgg
cggctcaaggaccaggaccaggatgaggaggacgaggagaaggagaagcgtgggcgcaag
aaggccagtgagctgcgcatccacgacctggaggatgacctggagatgtcctctgacgac
agcgaggccagtggcgaggagggcggccgagccctcaaagccaagaagaaggcgccaccg
agcaaggggggcaggaagaagaagaagaagaaagggtcagacgacgaggcctttgaggac
agtgacgacggggacttcgagggccaggaggtggactacatgtccgacggctccagcagc
tcccaggacgagctggagggcaagcccaaggtcacccagcaggaggagggccctaagggc
gtggacgagcagagcgagagcagcgaggagagcgaggaggagaagccgcccgaggaggac
aaggaggacgaggaggagaagaaggcgcccacgccgcaggacaagaagcggaagaaagac
agcagcgaggagtcggacagctcggaggagagcgacatcgacagcgaggcctcctcggcg
ctcttcatggcggtaaggcccagcccggggcggggggacggcgtgtccctctccagactc
acatccccaactccggtgtcccagaagaagaagacgccccccaagagggagcggaagcag
tcaggcggcagctcccggggcaacagccggcccggcacacccagcacggagacgggcagc
acttcctccaccctgagggcggccgccaacaagctggagcaggggaagcggaccagcgag
acgccggcggccaagcggctgcggctggacaccgggccccagagcctgtcggggaagtcc
acccctcagccccagtccgggaagtccactcccagcagcggcgacgtgcaggtgaccgag
gatgccgtgcgccgctacctgacacggaagcccatgaccaccaaggacctgctgaaaaag
ttccagaccaagaagacggggctgagcagtgagcagacggtgaacgtgctggcccagatc
ctcaagcgcctgaaccccgagcacaagatgatcaacgacaagatgcacttctccctcaag
gagtga
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