Phocoena sinus (vaquita): 116752014
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Entry
116752014 CDS
T07759
Symbol
CHSY3
Name
(RefSeq) chondroitin sulfate synthase 3
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
psiu01100
Metabolic pathways
Module
psiu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
116752014 (CHSY3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psiu01003
]
116752014 (CHSY3)
Enzymes [BR:
psiu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
116752014 (CHSY3)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
116752014 (CHSY3)
Glycosyltransferases [BR:
psiu01003
]
Glycan extension
O-Glycan
116752014 (CHSY3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Galactosyl_T
Glyco_tranf_2_2
Thioredox_PDIA6_C
Motif
Other DBs
NCBI-GeneID:
116752014
NCBI-ProteinID:
XP_032484466
Ensembl:
ENSPSNG00000002218
UniProt:
A0A8C9B0F7
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Position
3:complement(64282646..64569547)
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AA seq
882 aa
AA seq
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MAVRSRRPWMSVALGLVLGFTAASWLIAPRVAEMSERKRRGSSLCSYYGRSAAGAGAQQP
LPQPYARQWPEQSPPPARQELQGPQLPEAAPEVTSFRSSPWQQPPPLQQQRRGREPEGAT
GLPGAPVVEGEPEEEDGGAAGKRRGGRPGSSHNGSGDGGAAARSSRPRDFLYVGVMTAQK
YLGSRALAVQRTWARFIPGRVEFFSSQQPPNTGLGHPPPPLPVIALPGVDDSYPPQKKSF
MMIKYMHDHYLDKYEWFMRADDDVYIKGDKLEEFLRSLNSSKPLYLGQTGLGNIEELGKL
GLEPGENFCMGGPGMIFSREVLRRMVPHIGECLREMYTTHEDVEVGRCVRRFGGTQCVWS
YEMQQLFHENYEHNRKGYIQDLHNSKIHAAITLHPNKRPAYQYRLHNYMLSRKISELRYR
TIQLHRESALMSKLSNSEVSKEDQQLGVMPSFNHFQPRERDEVIEWEFLTGKLLYSASEN
QPPRQSISSILRTALDDTVLQVMEMINENAKSRGRLIDFKEIQYGYRRVDPLHGVEYILD
LLLLYKRHKGRKLTVPVRRHAYLQQLFSKPFFRETEELDVNSLVESINSDTQSFSFISNS
LKILSSFQGAKEMGGPNEKKIHVLVPLIGRYDIFLRFMENFENTCLIPKQNVKLVIILFS
RDSGQDSSKHIELIQEYQNKYPKAEMTLIPMKGEFSRGLGLEMGSSQFDNDTLLLFCDVD
LIFRGDFLQRCRDNTIQGQQVYYPIIFSQYDPKVTNGGSPPTDNDFVFSKKTGFWRDYGY
GITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVIQSGLRPFRSQEVGVVHIFHPVHCDP
NLDPKQYKMCLGSKASTFASTVQLAELWLEKHLGVRYNRTLS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcgttcccgccgcccgtggatgagcgtggcattggggctggtgctgggcttc
actgccgcgtcctggctcattgcccccagagtggccgagatgagcgagaggaagagacgc
ggttccagcctctgttcctactacggccgctcggccgctggcgccggcgcgcagcagccg
ctccctcagccttatgcccggcagtggccggagcagtcgccgcccccagcgcgccaggag
ctccaggggccgcagctgcctgaagcagcgccggaggtaaccagttttcgcagcagcccc
tggcagcagccacctccactgcagcagcagcggcgaggacgcgagcccgaaggcgcgacg
gggctccccggagcccctgtagtcgaaggggaacctgaggaggaggatggaggcgcggct
gggaagcggagaggcggtcggccggggagtagccacaacggcagcggagacgggggcgcc
gccgcccggagctcccgaccccgggatttcttgtacgtgggggtgatgaccgcgcagaag
tacctgggcagccgcgcgctggcagtgcaacggacctgggcgcgctttatccccggccgt
gtggagttcttttccagccagcagccccccaacactgggcttggccaccccccgccaccc
ctgcctgtcatcgcgctgcctggggtggacgactcctatcctccccagaaaaagtccttc
atgatgatcaagtacatgcacgaccactacctggacaagtatgagtggttcatgcgcgcc
gacgacgatgtctacattaaaggtgataagttggaagagtttcttagatcactgaatagc
agcaagcccctctacctgggccagactggcctggggaatattgaagaacttggaaagctg
gggctggagcctggggagaacttctgcatgggaggacctggaatgatcttcagtcgcgag
gttctcaggaggatggtgccacatattggtgaatgcctcagagaaatgtacacgactcac
gaggacgtggaagtaggaagatgtgttcgacgttttggtgggactcagtgcgtctggtct
tatgagatgcagcagctgttccatgaaaattatgaacacaatcggaagggttatatccaa
gaccttcacaacagcaaaatccatgcagccataacacttcatccaaacaaaaggcctgcc
taccaatacaggcttcataattacatgcttagccgcaaaatttctgaacttcgctaccgc
accatccagctccaccgggagagcgctctgatgagcaagctcagtaacagcgaagtgagc
aaagaggaccagcagctgggagtgatgccttctttcaatcacttccagcctcgggagaga
gatgaagtgatagaatgggagttcctgacagggaagctcctctactcagcatctgagaac
cagcctccccgacagagcatcagcagcatcctgagaacagcgctggatgacaccgtccta
caggtgatggagatgatcaatgagaatgccaagagtagaggacggctcatcgacttcaag
gaaattcagtatggctaccgcagggttgatcccctgcatggggtggagtacatcttggat
ttactcctcttatacaaaagacacaaggggaggaaactgactgtgccagtaagacgtcat
gcctatcttcagcagttgttcagcaagcctttcttcagagaaactgaagagctagatgtc
aacagtcttgtagagagtattaacagtgacactcagtcattctcctttatatctaattct
ttaaagatattatcttcttttcaaggtgccaaagaaatgggagggcccaatgaaaagaaa
atacatgttcttgtccctctcattggaaggtatgatattttcttgagattcatggagaac
tttgaaaacacgtgtcttatcccaaagcagaatgtaaagctggtcatcatccttttcagt
agggattctggccaagattccagcaagcatattgagctgatacaagaatatcaaaacaag
taccctaaagcagaaatgaccctgatccccatgaagggagagttttccagaggtcttggt
cttgaaatgggatcttcccagtttgacaatgatactttgctgctattttgtgatgttgac
ttgatcttcagaggagactttctccaacgatgtagagacaatacaattcagggacaacag
gtatactatcccatcatctttagccagtatgacccaaaggtaaccaatgggggaagtcct
cccactgataatgactttgtcttctcaaagaagactggattttggagagactatggatat
ggaattacctgtatttataaaagtgatcttctgggtgcaggtggatttgatacctcaata
caaggctggggactggaagatgtagatctctacaataaagttattcaatctggcttaagg
cccttcagaagtcaagaagtaggagtggtgcatattttccatccagttcattgtgaccct
aacttggaccctaagcagtataagatgtgcttaggatccaaggcaagtacttttgcctca
accgtgcaactggctgaactgtggttggaaaaacatttgggtgtcaggtacaatcgaact
ctctcctga
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