Phocoena sinus (vaquita): 116752024
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Entry
116752024 CDS
T07759
Symbol
CSF1R
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04010
MAPK signaling pathway
psiu04014
Ras signaling pathway
psiu04015
Rap1 signaling pathway
psiu04060
Cytokine-cytokine receptor interaction
psiu04061
Viral protein interaction with cytokine and cytokine receptor
psiu04151
PI3K-Akt signaling pathway
psiu04380
Osteoclast differentiation
psiu04640
Hematopoietic cell lineage
psiu05200
Pathways in cancer
psiu05202
Transcriptional misregulation in cancer
psiu05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116752024 (CSF1R)
04014 Ras signaling pathway
116752024 (CSF1R)
04015 Rap1 signaling pathway
116752024 (CSF1R)
04151 PI3K-Akt signaling pathway
116752024 (CSF1R)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116752024 (CSF1R)
04061 Viral protein interaction with cytokine and cytokine receptor
116752024 (CSF1R)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
116752024 (CSF1R)
09158 Development and regeneration
04380 Osteoclast differentiation
116752024 (CSF1R)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116752024 (CSF1R)
05202 Transcriptional misregulation in cancer
116752024 (CSF1R)
09162 Cancer: specific types
05221 Acute myeloid leukemia
116752024 (CSF1R)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psiu01001
]
116752024 (CSF1R)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psiu04090
]
116752024 (CSF1R)
Enzymes [BR:
psiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116752024 (CSF1R)
Protein kinases [BR:
psiu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116752024 (CSF1R)
CD molecules [BR:
psiu04090
]
Proteins
116752024 (CSF1R)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
C1-set
V-set_CD47
VEGFR-1-like_Ig-like
PKD_3
Motif
Other DBs
NCBI-GeneID:
116752024
NCBI-ProteinID:
XP_032484482
Ensembl:
ENSPSNG00000018376
UniProt:
A0A8C9CP78
LinkDB
All DBs
Position
3:45747029..45777577
Genome browser
AA seq
1029 aa
AA seq
DB search
MDSNSTSTIWGRRGISPRRRKRKIRQTASAAERSSCPVVLVPEEPVSRNLAPCPPPSPAS
ACRLPPEAMGPGTLLILLVATAWHGQGLPVIEPSGPELVVEPGTAVTLRCVSNGSVEWDG
PISTYWTLDADAPSGILTTNNATFLNTGTYRCTERGDPLGGSATIHLYVKDPVRPWRVLV
EEVTVMEGQDALLPCLLTDPALGAGVSLVRVRGRPVLRQTNYSFLPSHGFIIHKAKFIES
QDYECSARVDGRMVKSLSIRLKVQKVIPGPPTLTLKPTELVRIQGEAAQIICSASDVDVN
FDVFLQHGDTKLTISQQSDFHDNRYQKVLTLNLDHVDFQDAGNYTCMATNARGIHSTSMV
FWVVDSAYLNLTSEQNLLQEVTVGEKIELKVKVEAYPSLQSFNWTYQGPFLGHQPKLNFV
TNKGTYRYTSTLTLLRLKPFEAGHYSFQARNARGEETLTFELTLLYPPEVEVTWTLINGS
KTLLCEASGYPQPNVTWVQCRGHTNRCGKTQVLVLDDPNPEVLSQKPFHKVTVQSLLATG
TLEHNRTYECRAYNSLGNSSQAFGPVSVGAYTQPLDEPLFTPVLVACMSVTALLLLLLLL
LLYKYKQKPKYQVRWKIIESYGGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGK
VVEATAFGLGEEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH
GGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLNPGQDPKAGTGYKNIHLEKKYIRRDSGF
SSQGVDTYVEMRPVSTSSSNDSFSEQDLDKENGRLLELRDLLHFSSQVAQGMAFLASKNC
IHRDVAARNVLLTSGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV
QSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWA
LEPTRRPTFQQICSLLQEQVLVDRREQDYSNLPSSSSEPEEESSSEHLGCCEQGGIAQPL
LQPNNYEFC
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaattccacctctaccatttggggaagaagggggatcagcccaagaaggagg
aagaggaaaataagacagacagccagtgcagcggagaggagctcatgtccagttgtcctg
gtccctgaagagccagtgtccaggaatctagctccctgcccacccccaagccctgcatcg
gcctgccgccttccccctgaggccatgggcccagggactctgctgatccttttggtggcc
acagcttggcacggtcaggggctcccggtgatagagcccagtggccctgagctggtcgtg
gagccaggcacagccgtgaccttgagatgtgtgagcaacggcagcgtggaatgggacggc
cccatttccacctactggactctggacgctgacgcccccagcggcatcctcaccacgaac
aatgccaccttcctaaacacgggaacctaccgctgcactgagcgtggagaccccctgggg
ggcagcgccaccatccatctctatgtcaaagaccctgttcggccctggagggtcctggtc
gaggaagtgacggtgatggagggtcaggacgcgctgctgccctgcctgctcacggaccca
gcgctgggggcaggcgtctcgctggtgcgggtgcgtggccgacctgtcttgcgccaaacc
aactactccttcttgccctcgcacggcttcatcatccacaaggccaagttcatcgagagc
caggactacgagtgcagtgctcgggtggacggcaggatggtgaagtccctcagcatccgg
cttaaagttcagaaagtcatcccaggacccccgaccttgacactgaagcctacagagctg
gtgcggattcaaggagaggctgcccagatcatatgctcagccagcgacgttgatgtcaac
tttgatgtcttcctccaacacggagacaccaagctcacaatctctcaacaatccgacttc
catgacaaccgttatcaaaaagtcctgaccctcaacctcgatcacgtagacttccaagat
gctggcaactacacttgcatggccaccaatgcccggggcatccactccacctccatggtc
ttctgggtggtagacagtgcctacttgaacttgacctctgagcagaacctcctccaggag
gtgaccgtgggtgagaagatagaactcaaagtcaaggtggaggcctacccaagcctgcaa
agttttaactggacctaccagggacccttccttggccaccagcccaagctcaattttgta
accaacaagggcacatacaggtacacctccaccctcaccctgcttcgcctgaagcccttc
gaggccggccactactccttccaggccagaaatgccagaggagaggagaccctgaccttt
gaactcacccttctataccccccagaggtagaggtcacgtggaccctcatcaacggctct
aaaaccctgctctgtgaagcctcagggtacccccagcccaatgtgacgtgggtgcagtgc
aggggccacacgaacagatgtggtaagacccaagtgctggtcctggacgacccaaaccct
gaggtcctgagccaaaagcccttccacaaggtgaccgtccagagcctgctggccactggg
accttggaacacaacaggacgtacgagtgcagggcctacaacagcctggggaacagctcc
caggccttcgggcctgtctctgtaggagcctacacgcagccccttgatgagcccctcttc
acgccggtgctggtggcctgcatgtccgtcacggccttgctgctgctgctactcctgttg
cttttgtacaagtacaagcagaagcccaagtaccaggtgcgctggaagatcattgagagc
tacgggggcaacagctacaccttcatcgacccaacccagctgccctacaacgagaagtgg
gagttcccccggaacaacctgcagtttggtaaaacccttggagcaggcgcctttgggaag
gtggtagaggccacggccttcggtctgggcgaggaagatgctgttctgaaggtggctgtg
aagatgctgaagtccacggctcacgctgacgagaaggaggccctcatgtcggaactgaag
atcatgagccacctgggccagcacgagaacatagtcaacctcctgggagcctgtacccac
ggaggccctgtcctggtcatcactgagtactgctgctatggcgacctactcaactttctg
cgaaggaaggcggaggccatgctgggacccagcctgaatccaggccaggaccccaaggca
ggcaccggctacaagaacatccacttggaaaagaaatacatccgcagggacagcggcttc
tccagccagggtgtggacacctatgtggagatgaggcccgtctccacttcttcatcaaat
gattcattctctgagcaagacctggacaaggagaacgggcggctgctggagctgcgtgac
ctgctccacttttccagccaggtggcccagggcatggcattcctcgcttccaagaactgc
atccaccgggacgtggcagccagaaacgtgctgctgaccagtggccatgtggccaagatt
ggggactttggtctggctagggacatcatgaatgactccaactacatcgtcaagggcaac
gcccgcctgcccgtgaagtggatggccccagagagcatcttcgactgcgtctacacagtt
cagagcgacgtctggtcctacggtatcctcctctgggagatcttctcacttggcctgaac
ccctaccctggcatcctggtgaacagcaagttctataaactggtgaaggacggataccaa
atggcccagcccgcgtttgccccaaagaacatatacagcatcatgcaggcctgctgggcc
ctggagccgacccgcagacccaccttccagcaaatctgctccctccttcaggagcaggtg
ctagtggatagaagagagcaggactacagcaacctgccaagcagcagcagtgagccggag
gaggagagctccagcgagcacctgggctgctgtgagcaggggggcattgcccagcccctg
ctgcaacccaacaactacgagttctgctga
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integrated database retrieval system
