Phocoena sinus (vaquita): 116752049
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Entry
116752049 CDS
T07759
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04068
FoxO signaling pathway
psiu04110
Cell cycle
psiu04120
Ubiquitin mediated proteolysis
psiu04150
mTOR signaling pathway
psiu05169
Epstein-Barr virus infection
psiu05200
Pathways in cancer
psiu05203
Viral carcinogenesis
psiu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116752049 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
116752049 (SKP2)
04150 mTOR signaling pathway
116752049 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116752049 (SKP2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116752049 (SKP2)
05203 Viral carcinogenesis
116752049 (SKP2)
09162 Cancer: specific types
05222 Small cell lung cancer
116752049 (SKP2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
116752049 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116752049 (SKP2)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116752049 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
F-box_5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
116752049
NCBI-ProteinID:
XP_032484523
Ensembl:
ENSPSNG00000004995
UniProt:
A0A8C9B7H4
LinkDB
All DBs
Position
3:complement(144145938..144178201)
Genome browser
AA seq
436 aa
AA seq
DB search
MHAFKTPEPADAMHRKHLQEIPDQSSNVTTSFTWGWDSSKTSELLSGMGVSALEKEEVDS
ENIPQELLSNLGHPQSPPRKRLKSKGNDKDFVIVRRPKLNRENFPGVSWDSLPDELLLGI
FSCLCLPELLKVSSVCKRWYHLAFDESLWQTLDLTGRNLHPDVVGRLLSRGVVAFRCPRS
FMDQPFVERFSPFRVQHMDLSNSVIDVSTLHGLLSHCSKLQNLSLEGLRLSDPIVNNLAQ
NTNLVRLNLSGCSGFSESALKTLLSSCCRLDELNLSWCYEFTEKHVQVAVAHVSETVTQL
NLSGYRKNLQRSDVSTLVGRCPSLVHLDLSDSVMLKSDCFPEFFQLNYLQHLSLSRCYDI
IPETLLELGEIPTLKTLQVFGIVPDSTLQLLKEALPHLQINCSPFTTIARPTTGNKKNQE
IWGIRCRLTLQKPSCL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcatttaaaactcccgaacctgcggacgccatgcacaggaaacacctccaggag
attcccgaccagagtagcaacgttaccaccagcttcacgtggggatgggattctagcaag
acttctgaactgctttcaggcatgggggtctccgccctggagaaggaggaggtggacagt
gagaacatcccccaggaactgctttcaaacctgggccacccgcagagccccccacgaaaa
cggctaaagagcaaagggaatgacaaggactttgtgattgtccgcagacctaagctaaat
cgagagaactttccaggtgtttcatgggactcccttccagacgagctgctcttaggaatc
ttctcctgtctgtgcctccctgaacttctgaaagtctccagtgtttgtaagagatggtat
catctagcgttcgacgagtctctctggcagaccttagacctcacgggcagaaacctccac
ccagacgtggttggtcggctgctgtctcgaggggtggttgccttccgctgcccacgatcg
tttatggaccaaccgtttgttgaacgtttcagcccttttcgtgtacagcacatggacctg
tcgaactcggtgatcgatgtgtctaccctccacggccttctgtctcactgctccaagttg
cagaatctcagtctagaaggcctacggctttcagatcccattgtcaacaatcttgctcag
aacacaaatttagtgcgattaaacctttctgggtgttctggattctctgaatctgccctg
aagactttgctgagcagctgttgcagattggatgaactgaacctctcctggtgctatgaa
ttcactgaaaagcatgtgcaggtggctgtcgcacacgtgtcagagactgtcacccagctg
aatctcagcgggtaccgaaagaatctgcagagatcggatgtctctaccttagttggaaga
tgtcccagtcttgtccacctagacttaagcgatagtgtcatgctgaaaagtgactgcttt
ccggaattcttccagctcaactacctccaacacctatcactcagtcggtgctatgacata
atacctgaaactttacttgaactcggagaaattcccacactaaaaacactacaagtcttt
ggaatcgtgccagacagtacccttcaactattaaaggaagcccttcctcatctacaaatt
aattgttcccctttcaccaccatcgctaggccaaccactggcaacaaaaagaaccaggag
atatggggcatcagatgccgactgacactgcagaagcccagttgtctatga
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