Phocoena sinus (vaquita): 116752105
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Entry
116752105 CDS
T07759
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03022
Basal transcription factors
psiu03420
Nucleotide excision repair
psiu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116752105 (CDK7)
09124 Replication and repair
03420 Nucleotide excision repair
116752105 (CDK7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116752105 (CDK7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psiu01001
]
116752105 (CDK7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116752105 (CDK7)
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116752105 (CDK7)
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116752105 (CDK7)
Enzymes [BR:
psiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
116752105 (CDK7)
2.7.11.23 [RNA-polymerase]-subunit kinase
116752105 (CDK7)
Protein kinases [BR:
psiu01001
]
Serine/threonine kinases: CMGC group
CDK family
116752105 (CDK7)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116752105 (CDK7)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
116752105 (CDK7)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116752105 (CDK7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
Haspin_kinase
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
116752105
NCBI-ProteinID:
XP_032484652
Ensembl:
ENSPSNG00000008636
LinkDB
All DBs
Position
3:complement(117752017..117780004)
Genome browser
AA seq
356 aa
AA seq
DB search
MAVDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIRDNSLVLTPSHIKAYMLM
TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM
CSLPDFVTFKSFPGIPLQHIFIAAGDDLLDLIQGLFLFNPCTRITATQALKTKYFSNRPG
PTPGCQLPRPNCPVDALKEQSNPAMATKRKRTEALEQGKTLIFTRNEFRKLQIGNI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggacgtgaagtcgcgagcaaagcgttatgaaaaactggacttcctcggcgag
ggacagtttgccacggtttacaaggccagagacaagaacaccaaccaaattgtcgccatt
aagaaaatcaaacttggacatagatcagaagctaaagatggtataaatagaacagcttta
agagagataaaattattacaggagctaagtcatccaaatataattggtctccttgatgct
tttggacataaatctaatattagccttgtctttgattttatggaaactgacctagaggtt
ataataagagataacagtcttgtgctgacaccatcacacatcaaagcctacatgttgatg
actcttcaaggattagaatatttacatcaacactggattctacatagggacctaaaacca
aacaacttgttgctagatgaaaatggagttctaaaactggcagattttggcctggccaaa
tcatttgggagccccaatagagcttatacacatcaggttgtaaccaggtggtatcgggcc
cctgagctactatttggagctagaatgtatggtgtaggtgtggacatgtgggctgttggc
tgtatattagcagagttgctcctaagggttccttttttgccaggagattcagaccttgat
caactaacaagaatatttgaaactttgggcacaccaactgaagaacagtggcctgacatg
tgtagtcttccagatttcgtgacatttaagagtttccctggaatcccgttacagcatatc
ttcattgcagcaggagatgacttgctagatcttatacaaggcttattcttatttaatccg
tgtactcgaattacagccacacaggcattgaaaactaagtatttcagtaatcggccaggg
ccaacacctggatgtcagctgccaagaccaaactgtccagtggacgctttaaaggagcag
tccaatccagccatggcaacaaaacggaagagaacagaggccttggaacaaggtaaaact
ctcattttcacaagaaatgaattcagaaaactccagataggtaatatatag
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