Phocoena sinus (vaquita): 116752267
Help
Entry
116752267 CDS
T07759
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116752267 (SH3TC2)
Membrane trafficking [BR:
psiu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116752267 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
SH3_1
TPR_12
SH3_9
TPR_1
SNAP
TPR_2
DUF5418
Motif
Other DBs
NCBI-GeneID:
116752267
NCBI-ProteinID:
XP_032484995
Ensembl:
ENSPSNG00000019837
UniProt:
A0A8C9CVV8
LinkDB
All DBs
Position
3:46706919..46770967
Genome browser
AA seq
1289 aa
AA seq
DB search
MGGCFCIPWERSLSWGPGKETSSKDPAISTEIISLSENKEKCFLPQNMTPDLTLSFSVKS
RSRRCVNGPLQEAARRRLWALENEDQEVRALFKDLSARLVCIQSQKAQFLITFKTMEEIW
KFSTYLNLGYVSMCLEHLLFDHKYWLNCRLVEDTEIHVSVDDKHLETIYLGLLIQEGHFF
CRATCSTAQPAEKEGEYLTLCKNELISVKTAEGEFEWEGVSLVTGQRGLVPVSALEPLPL
PFHQWFLKNYPGSCGLSRKRDWTGSYQIGRGKCKAWKEYEREEKDELNFHQGESIEIIGF
VIPGLQWFIGKSALSGEVGFVPTRNIDPDSYSPMSKNSTFFSDEERCSLGVPGSDRKAEC
ASFLHTLAQTDITSVYRLSGFESIQSLPNDLSASQPEGFKETRPGGAWEEHQAVGSRQSS
SSEDSSLEEELLSAASDTYHLPEPDDLDDPELLMDLNTGQEEEEAENFTPILAFLDHEGY
ADHFKSLYDFSFSFLTTSFYSYSEEDELVAYLEASRKWAKRSHMTWAHARLCFLLGRLSV
RKVKLSQARVYFEEAIHILNGAFKDLSLAAALYINLAAIYLRQRLRHKGSGLLEKAGAML
VCLPDREYSAKSELDVVAYVLRQGIVSGSCPLEARACFLAVRLLLILGRHDEVLPFAERL
QLLAGHPPTLDAAATILSFLYDKKYLPHLAVASVRQRGTQSTPGMALPIWQVHLVLQNTT
KLLGIPSPSWGEVSALACPALRQALAACEEQVDQSTQRTLCLILSKVYLQHRSPDGAIHY
LSQALMLGQLLSEQEAFESSLCLAWAYLLASQAKKALDILEPLLYSLKETESVTRKGVVH
NLLGLALQGEGRVNRAANSYLWALNRAQEARDVRNQAVALANLGHLTLKSWAQQPARDYL
LQAVQLYSKLQASMETDMELVQVLLWLAQVEVYRRQLASGRFCYEMALLFGLRHQHLKSQ
LQVTKSLCHFYSSVSPSPEACITYHEHWLALAQQLRDREMEGRLLESLGQLYRNLNTARS
LRRSLTCIKESLRIFVDLGERDKAAEAWLGAGRLHYLMQEDELVELYLQAAIQKALKSEE
PSLALRLYEEAGDVFFNGTRHRHRAVEYYRAGAVPLARRMKAVKTELRIFNKLTELQISL
EGYEKALEFATLAARLSTVAGDQRQELVAFHRLATVYYSLHMYEMAEDCYLKTLSLCPPW
LQSPKEALYYAKVYYRLGQLTFYQLKDAHDATEYFRLALAAAVLLGDEELQDIIRTRLDH
ICQSPLWHSSPSGRSSERARWLSGGGLAL
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgggtggctgcttctgcatcccttgggagcggagtctgtcctgggggccaggtaaagaa
acttcttccaaggatccagccatatccactgagattatatccttatctgaaaacaaggaa
aaatgtttcctgccacagaatatgactccagatctgacgctctccttcagtgtgaagagc
cgctccaggaggtgtgtaaatggccccttgcaagaagcagccaggaggcggctctgggcg
ctggagaatgaggaccaggaggtgcgtgcattgtttaaggacctctcagctaggttggtg
tgtatacagtcccagaaggcccagttcctcattaccttcaagaccatggaggaaatctgg
aagttctccacctacctgaacttaggctacgtatccatgtgtctggagcatctcctcttt
gatcacaagtactggcttaactgccgactggtggaggatacagagatccacgtgtcagta
gatgataaacacctggaaacaatatacctgggacttctgatccaggaaggtcacttcttc
tgcagagccacgtgctccacggctcagccagctgagaaggaaggggagtatttgacactt
tgcaagaacgagttaatctcggtgaagacagctgaaggcgagttcgagtgggaaggcgtg
tccttggtgacgggtcagcggggcttggtgccagtgtcagccttggaacccctgcctctc
cctttccaccaatggttcctaaagaattatccaggaagctgtggcctttccaggaagagg
gattggacaggctcctatcagatcggtagaggaaaatgtaaggcctggaaagaatatgag
agggaagaaaaggatgaactgaatttccaccagggagaaagcattgagatcatcggcttt
gtcattcctgggcttcagtggttcattgggaagtcagcgctctcaggagaagtgggcttt
gtccccaccaggaacatagatcctgattcttattccccaatgagcaagaactccaccttt
ttcagtgatgaggaaagatgctctctgggcgtcccgggaagtgacaggaaagctgagtgt
gccagcttcctccacacgcttgctcagactgacataacatctgtctaccggcttagtggg
tttgaatccatccagagtcttccaaacgacctgagcgcgtcccagcccgaaggcttcaag
gagacccggcctggtggagcctgggaggagcatcaggccgtgggctccagacagtccagc
agctccgaggactccagcctggaggaggagctcctttcagccgcctcagacacctaccac
ctgccagagcctgatgacctcgatgacccggagctgctcatggacctgaacaccggtcag
gaggaggaggaggctgagaacttcacccccatattggcttttctggatcacgagggttat
gctgaccactttaagagcctctatgatttttccttctctttcctcacgacttccttctac
agctactctgaggaggatgagctcgtggcctacctggaggcctcgaggaagtgggccaag
cggagccacatgacctgggcccatgcccggctctgcttcctcctgggccggctaagtgtt
aggaaggtcaaactctctcaggccagggtgtactttgaggaggccatccacattctcaac
ggggcatttaaggacctatccttggcggctgccctgtacatcaatttggcagccatctac
ctgaggcagaggctgaggcataaaggctcgggcctgttggaaaaggcaggtgccatgttg
gtctgcctgcctgaccgggagtatagtgccaagagtgagctggatgtggtggcctatgtg
ctgagacagggcatcgtgtcgggcagctgccccctggaggccagagcctgcttcctggcc
gtccgattgctcctaatcctcggccggcacgatgaggtcctgcccttcgccgagcgcctg
cagctcctcgctggacaccctcccaccttggatgctgcagccactatcttgagttttctc
tatgacaagaaatacctgccacaccttgcggtggcttctgtccggcaacgtggtactcag
agcaccccagggatggcccttccaatttggcaggtccacctggtcctccagaacaccacc
aagctccttggcatcccctccccaagctggggtgaagtctctgccctggcgtgcccagca
ctcaggcaggcactggctgcctgtgaggagcaggtggatcagagcacccagaggaccctg
tgtctcatcctgtccaaagtgtacctccaacataggtctcctgatggtgccatccactac
ctgagccaagccttgatgctaggccagctgctgagtgagcaggaagcttttgagtcttcc
ctctgcttggcatgggcctatctcttagccagccaggcaaagaaggctttggacatcctt
gagccactcttatattccctgaaggagacagagagtgttacccgaaagggagtagtccat
aacctcctgggactcgcacttcaaggtgaaggccgggtgaacagggcagccaacagctat
ctttgggccttgaacagagctcaggaggcaagggatgtgcgcaaccaggcggtggctttg
gccaatcttggccatctgacccttaaatcctgggctcagcagccagccagggactatctt
ctgcaggcggtgcaactctattctaaactccaggccagcatggagacagacatggaatta
gtacaggtgcttctctggttggcccaagttgaggtgtaccgacgccagctggccagtggc
cgcttttgttacgaaatggcattgctgtttggattaaggcatcaacacctgaagagtcag
cttcaggtcaccaaatccctctgccatttctacagctctgtgtccccaagccccgaggca
tgtatcacctaccacgagcactggctggccctggctcagcaactcagggaccgggagatg
gaggggaggctgctggagtcccttgggcagctctatcggaacctaaatacggccaggtcc
cttaggaggtccctcacctgcatcaaggagagcctgcgtatcttcgttgacctgggggag
agagacaaggctgctgaggcctggcttggggctgggcgactccactacctcatgcaggaa
gacgagctggtggagctgtacctgcaggcagccatccagaaagccctgaagtcagaggag
ccctccctggctctcaggctctacgaggaagcaggtgatgtgttcttcaatgggacccgc
cacaggcatcgtgcggtggagtattaccgagctggggctgttcccttagcaaggaggatg
aaggcagtgaaaaccgagctccggattttcaacaagctgacagagctgcagatcagcctg
gaaggctatgagaaggctttggaatttgccaccttggcggccagactcagcacagtcgca
ggagatcagaggcaggagctggtggccttccaccgtctggcgactgtgtactattccctg
cacatgtacgagatggctgaggactgctacctgaagactctgtcgctctgtccaccctgg
ttgcagagccccaaggaggccttatactatgccaaggtgtattatcgcctgggccaactc
accttctaccagctgaaggatgcccacgatgccactgaatacttccggctggccctggct
gcagcagtcctgctgggtgacgaggagctgcaggacatcattaggaccaggctggaccac
atctgccagagccccctctggcatagcagcccctctgggcgctcctcagagagggcgcgg
tggctgagtggtgggggcctggccctctga
DBGET
integrated database retrieval system
